| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1083 |
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| Symbol | |
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| ID | 3741290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 1205546 |
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| End bp | 1208506 |
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| Gene Length | 2961 bp |
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| Protein Length | 986 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637778361 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_384048 |
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| Protein GI | 78222301 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0721424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00000190438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGAAAAA TCACAGTAAA CGTTATCGCG CTGAATATTC TCTTTGTCAT CGGCGCTACC
GTGATCACCA CGTTCCTCTT CCTGGCGGCA ATGCGCGATG AATCGGAACG GCTGGCAAAG
GTGGAGCAGG AACAGGGGAT CCAGACCTTC TGGAGGCTCC TCAGGGCCAA GGGGACCGAT
TTCAGGATTG TCGACGGCAA GCTCATGGCG GGGGACTATG TCCTGAACGG CAATTTCGAA
CTCCCTGACA TGATCCAGTC GATCTTTGGC GGCACCGCGA CGGTCTTCAT GGGTGATACG
CGGGTTGCCA CCAACATCCG CAGGGAAGAC GGGACCCGTG CCGTCGGTAC CAAGTTGAAC
GGACCCGCCT ACGACGCCAT CTTCAGGCAC AACAAACCCT TTCGCGGTGA GGCATTGATT
TTCGGCATCC CCTATTTCAC CGCCTACGAC CCCATCAGAA ACAGCCGGGG CGAAATCATC
GGCGTACTCT ACGTGGGTGC CAGGAAGAAC GAATTCCATT CGCGGTACGA GCACTATAAG
GTCAATGTCA TCGCCGGCGC AGCGGTCATA TCCACTATCT TTACGGTTCT GGCCTTCGTG
GTTCTCAGGG ACAGAAAACG CCACCTTGAG GCACTTCAGG ACAACGAAAC CAAGTACCGG
ACCCTCTTCG AGAGTTCCTC AGAGGGAATT CTCCTGTTCG ATGGCGTTAT TTTTGACTGC
AACGAACAGC TGTGTCGACT GTTTGGCAGC AGCCGCAATG AAATCATCGG GAGATCTCCT
GTTCACTTCT CTCCGGAACT GCAGTCCGAC GGCACCCCCT CCGCCGAAAA AGCCCGACAC
ATGCTTAACA CTACCCTGGG TGGGGAAGCC GGGATCTTCC CCTGGCAGCA CCGGAGACAG
GACGGCACCT TGGTCGACAC CGAGGTTTCC CTGAAGGCGT TGACCATCCA GGGACGCACG
GTTCTTCAGG CGGTGGTGCG AGACGTTACC GAATGGGAAA AGGCCGAGGA ATCGCTACGG
ATGATCCGCC TACAGCAGCA GGCCATACTC GACAACATTC CCGACCTGGT CTGGCTCAAG
GACATCGAAA GCAGATTCAT CACCGTCAAC GCGGCGTTTG CCCAGGCATG CGGCACCCTC
CCCGCCGACC TGGTGGGGAA GACTGACCTG GACATCTGGC CCAGCGACCT GGCCACCCTC
TATCGCGAGG ACGACGCCCG GGTCATAGCG TCGGGCAAGC AGGTCCGCAC CGAGGAGCCC
CTCGCCGACG TCAACGGAAA GGGAGTCTGG ATCGAAACCA TCAAGATGCC CATTTATGAC
GAGGCGGGAA CGGTCATCGG CACCACGGGC ATCGCCCGGG ACATTTCGGA GCGGCGGGAG
GCGGAACTGA AGCTACGGGA GAACGAGGCC CGGCTCGCAA GGGCCCAGCA GATTGCCCAT
GTGGGGAACT GGGAATGGGA TATTCTCAAC AACTCTGTTC AATTTTCCGA TGAACTTCTC
CGGATATTCC GCATCCCCCC CGGCCAGCCC AACATGACCT ACGAAACATT TCTGGAAGCG
GTCCATCCCG ACGACCGGCA AGCCGTAAAC GATACCATCA ATGCAACTCT GCACGAACAG
GCACCCTACG GTAAAACGTA TCGCATTATC TGCCCTGACG GGGAGATCAG GCATCTCCGG
GCAGAGGGAG AGGTCGAGTT CGATGCGGAA GGGGCTCCGG TGCGGATGCA GGGGGTCGTC
AAGGACATTA CGGTAAGTAC CCTTGCCGAG GAGGCCCTGC GTGAGAGTGA AGCCCGCTTC
CGGGAGATCT TCGAACAGAA TGAGGACGCC ATCATCCTGA TGGCTCGGGA AACCCTGGAC
ATCATCGATG CCAACAGGGC CGCGGAGACA CTGATCGGCC GCGACAAGGA GTCACTCAAC
TGGCTCGGCC CCTGGTCGTT CATCGTGCCC GACGACTACA ACCCGTTCAT CGCGGCCATC
CCCCCCGTCG ATGATACGAC CCCCTTCCAC CTTAACCGCA TCGGCGTTGT CAGGTCCGAC
GGAACCCGTC TCATCTCTTC GATCTGGGGC AAAATCATCC GGCTGCGGGA CACGGAGGTG
GTCTACTGCT CCATCCGCGA CCTCACCCAG AGGATCCGCA TGGAGGAAGA GGCACAGATC
ACCCATGCCC ACCTTATCCA CACCAACAAG ATGGCCTCCC TCGGCGTCCT CGTCTCCGGC
ATAGCCCACG AGATAAACAA CCCCAACACC TTCATCCAGG GGAACGCATC GCTCATCGAA
AGTTTCTGGC GCGACACCGT CCCGATCCTC GACCGCCATC GCACCGAAAA TGGTGATTTC
ATCCTCGGCG GCCTCCCCGT CGCGGAGGTA GAGCGAATCT TCCCCCGCCT TCTCCACGGG
GTAAAGGAGG GTTCGCGCCG CATCAGCGCC ATCGTCAACA ACCTCAAGGA CTTCGCCCGG
GAGGATACCG CGAAGGCTTT CGTGCCGATC GCCGTCAACA ACATCGTTGA AAATGCAAAG
ATGATTCTCA GCTACCAGAT TCACCGCTAC ACCGACCATT TCCGCATGGA ACTGGCCGAA
GGCCTCCCGC TGGCCCGGGG GAAATTTCAG CAGATAGAAC AGGTGGTCAT CAACCTGATC
ATGAACGCCC TGCAGGCGCT TCCCGGCAAG GACGCAGGGG TCACCGTCTC CACATCCGCC
GACCCCGTTG CCTCGGTGGT CACCATCAGC GTACGCGATG AGGGAGAAGG GATGCAGTGG
GAGGTTCTGG AGCGGATCAC CGAGCCCTTC TTCTCCACCA AGCTTGAACA GGGAGGGACC
GGTCTCGGAC TCTCCATCTC CGCAGCCATC ATCAGAGAAC ACGACGGCAC GCTGACATTC
GAATCGACTC CCGGCAAGGG AACCACCGCC ACGGTAACCC TGCCGCTCGC CTATCCCGCC
GGAGAACGAA ACCATGCCTG A
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| Protein sequence | MRKITVNVIA LNILFVIGAT VITTFLFLAA MRDESERLAK VEQEQGIQTF WRLLRAKGTD
FRIVDGKLMA GDYVLNGNFE LPDMIQSIFG GTATVFMGDT RVATNIRRED GTRAVGTKLN
GPAYDAIFRH NKPFRGEALI FGIPYFTAYD PIRNSRGEII GVLYVGARKN EFHSRYEHYK
VNVIAGAAVI STIFTVLAFV VLRDRKRHLE ALQDNETKYR TLFESSSEGI LLFDGVIFDC
NEQLCRLFGS SRNEIIGRSP VHFSPELQSD GTPSAEKARH MLNTTLGGEA GIFPWQHRRQ
DGTLVDTEVS LKALTIQGRT VLQAVVRDVT EWEKAEESLR MIRLQQQAIL DNIPDLVWLK
DIESRFITVN AAFAQACGTL PADLVGKTDL DIWPSDLATL YREDDARVIA SGKQVRTEEP
LADVNGKGVW IETIKMPIYD EAGTVIGTTG IARDISERRE AELKLRENEA RLARAQQIAH
VGNWEWDILN NSVQFSDELL RIFRIPPGQP NMTYETFLEA VHPDDRQAVN DTINATLHEQ
APYGKTYRII CPDGEIRHLR AEGEVEFDAE GAPVRMQGVV KDITVSTLAE EALRESEARF
REIFEQNEDA IILMARETLD IIDANRAAET LIGRDKESLN WLGPWSFIVP DDYNPFIAAI
PPVDDTTPFH LNRIGVVRSD GTRLISSIWG KIIRLRDTEV VYCSIRDLTQ RIRMEEEAQI
THAHLIHTNK MASLGVLVSG IAHEINNPNT FIQGNASLIE SFWRDTVPIL DRHRTENGDF
ILGGLPVAEV ERIFPRLLHG VKEGSRRISA IVNNLKDFAR EDTAKAFVPI AVNNIVENAK
MILSYQIHRY TDHFRMELAE GLPLARGKFQ QIEQVVINLI MNALQALPGK DAGVTVSTSA
DPVASVVTIS VRDEGEGMQW EVLERITEPF FSTKLEQGGT GLGLSISAAI IREHDGTLTF
ESTPGKGTTA TVTLPLAYPA GERNHA
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