| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1054 |
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| Symbol | |
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| ID | 3739501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1169529 |
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| End bp | 1171187 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637778332 |
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| Product | GAF sensor signal transduction histidine kinase |
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| Protein accession | YP_384019 |
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| Protein GI | 78222272 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.000699137 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAACC GGGAAAAACT CCTTGAGCAG CTGACCGGGG TCGACTCCTC CAAGCTCAAC
TACTATATCG AGCTGAAAAA GCGCAACCAG GAGATCCTCA AGCAGAACAG CCGCCTGGAG
ATCCTCCAGC AGTTGACGCG CGACATCAAT ATCGACATGT CCATGGAGGA TATCCTCGAA
CGGGCGTTCA CCAAGTTTCC CCAGACCCTT CCCTGCGATT TTCTCGGTCT CGTGAGGGTC
CGTGACGGCG AGTTGCGGCT CATGGCCCTG ATGCCGCGGG ATTTCTGCAG AATCGACAAT
TTCCCTGCCC ACTCACCGAC GCTCAACGTC ATCAGTAACA GGAAGGCCGG GATTTACAAC
CTGACTCCGG AAGAACTCAG CCATGTCCAG ATAAACCCCC ATTACCCGGG GCCGCTCCGG
TCCCTGGCGA TTGCGCCGAT GTTCCAGCGC GACGAGGTGA TCGGCGCCCT CATTGTCGCC
AGCATTATCG ACGGCGCCTA CAACGAGGCG GATCTCAGCT TTGTCCAGCA TCTGGCCGAC
CAGCTCTCCA TCAGCATCCA GAACGCCCGG CTCTACAAGC AGGTCTCGCG GGCCAAGAAG
GAGTGGGAGG AGACCTTCCT GGCGGTTACC GACCCGATTT TCCTGGTTGA CACCGACTAC
AACGTCCTGC TTCACAACAA CCGGCTTTCT CCGGCAATGA GCGGGTTCTG GAACCAGGCG
GTGAGCAACA AGTGCTTTGC CAGGCTCCAC GGCCGCACCC ATCCCTGCGA GAACTGCCCC
ATCAAGGAGG TCCAGCGGAC CGGCAAGCCG GTTTTCCAGC GCTGGCAGAC CGACGCGGGG
CTGCTCCTCG ATATTTCCTA CTACCCGGTG TTCAACGAAG AGAAGCAGCT GTCGGCCGTG
ACGATCATCA TCAAGGATGT CACCGACAAG ACCAAGATGG AGGCGCAGCT GGTCCAGACG
GCAAAGCTGG CGGCCCTCGG AGAGATGGCG GCCGGGGTGG CCCACGAGCT GAACAGCCCC
ATGACCGTCA TCATCGGCAC GGCGCAGCTG CTCCTCAGGG AGCTCCAGCA GGATGCCCAG
TACGACCGGG CCGAGGTGCT GGAAGACATA GTCAATTCGG GCCTGCGCTG CAAGCGGATC
ATCCAGAACC TGCTGACCTT CTCCCGGCAG AATCAGCCGC CGGTAACGGA CATCGACTTG
AATGTCGAGG TGGAGCGGGT TCTGAGCATG ATCCAGTACC AGATCAACCG GAACCAGATC
AAAATTGTCG AGCAGCTTGC CCCTTTCCTG CCGCGGCTTA CCGCCAACGG CTCCCAGATC
CAGCAGGTGC TGACCAACCT GCTGATCAAC GCCCGGGATG CACTCGGCGA GGTCGACCGC
AAGGAGAAGG TCATTACGGT GGCGACGGCG CTGCTGGTGA GGGACCGGAA GAAGTGGGCC
GTCCTCAGTG TGAGAGACAA CGGCACCGGC ATCGCCCCGG AGAACCTGTC GAAGATTTTT
ACCCCCTTTT ACACGAGCAA GGAGGCGACC AAGGGGACCG GCCTCGGCCT CTCGGTCAGC
CTGGGGATTG CCGAGTCCCA TAATGGCACC ATCGAGGTGG AGAGCCGCCT TGGGGAGGGG
AGCACCTTTT CGCTGCTCCT CCCCATAGAG CATCAGTGA
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| Protein sequence | MENREKLLEQ LTGVDSSKLN YYIELKKRNQ EILKQNSRLE ILQQLTRDIN IDMSMEDILE
RAFTKFPQTL PCDFLGLVRV RDGELRLMAL MPRDFCRIDN FPAHSPTLNV ISNRKAGIYN
LTPEELSHVQ INPHYPGPLR SLAIAPMFQR DEVIGALIVA SIIDGAYNEA DLSFVQHLAD
QLSISIQNAR LYKQVSRAKK EWEETFLAVT DPIFLVDTDY NVLLHNNRLS PAMSGFWNQA
VSNKCFARLH GRTHPCENCP IKEVQRTGKP VFQRWQTDAG LLLDISYYPV FNEEKQLSAV
TIIIKDVTDK TKMEAQLVQT AKLAALGEMA AGVAHELNSP MTVIIGTAQL LLRELQQDAQ
YDRAEVLEDI VNSGLRCKRI IQNLLTFSRQ NQPPVTDIDL NVEVERVLSM IQYQINRNQI
KIVEQLAPFL PRLTANGSQI QQVLTNLLIN ARDALGEVDR KEKVITVATA LLVRDRKKWA
VLSVRDNGTG IAPENLSKIF TPFYTSKEAT KGTGLGLSVS LGIAESHNGT IEVESRLGEG
STFSLLLPIE HQ
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