| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1027 |
|---|
| Symbol | |
|---|
| ID | 3738132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1142610 |
|---|
| End bp | 1144043 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637778305 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_383993 |
|---|
| Protein GI | 78222246 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.00128931 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGGGA TGCCGAACTC CATACAAGGA AGGCTCTTCC TCTCGATTGT CACGTTTACG
TCTCTGTTGT TCATCGCGGT CGGCGTCTTC ATCTACCGCG AGGTAAACGG GATCGTTATC
GGCGCGGTTG ACAGGACCCT TCACTCCAAA GTACAGGTGA TTACCGGGCT CCTCCATGAG
GAGGACCACA CCATTGAACT GGAGTTGGAG GAGGTTGTTT CCGGGGAATA TTCCATCCCG
CGGTCCGGGC ACTACTTCAA GGTGATGATG AACGGGAAGC TCCTCGCCGC ATCGCCTTCG
CTGGTTAACG ACAGCTTCGA TCTCGGCGCC GGGGCACCTG AACCTTCTGA CGAAGAACTC
GGAGAAGATA TCTCTACCTC CGTGGGGCCT GCCGGCGAGC CGATTCGGGT GCTTCGGCAC
AATCTCAGCG CCTTTGGCAT GACGTTCACC GTCTTTGTGG CGGAGAGCCT CAGCGACAGC
CTCGATATGA TCAGCACCTT CAGACGTTTT CTCCTTCTGG TCATCCCTTC GGGGATCGTG
ATCGCCTCTC TCATCTGCCT GTGGATAGCA CGGCAGTCGC TGGCCCCCCT CGCGATATTT
TCCGGCAGGA TCGAGACCAT CACCCACAAA AACCTGGGGG AAAGGATCGA TGCCGAATCG
GAGACCCGGG AGTTGGCCGG ACTGGCCGGC TCATTCAATA AGATGCTCGA TCGGTTGCAA
AAGGTGTTCG AGAGCGAGAA AAGACTGATC GCGGATGCTT CCCATGAGCT CAAGACCCCG
GTTTCGGTGA TCAAGGTCCA GTGTGACGTG GTGCTGCAAA GGGAACGGAC GCCGGAAGAG
TACATTGATG CCATACAGAC CATCAGGACG GTCTCCGATA CTATCAGTAT GATCGTGAGG
GACCTTCTCT CCCTCGCCCG CCTTGACTCA GGTGTCTTTT CGCAGGGATT TGCGGTCGTA
TCCCTTAACG CCTGCATCGG GAGAGCGCTG GACATGACGA AGCCTTTTGC CGAAAAGAGA
CACCTTCAGG TTATCGCAGC ACTGGGAGAC GACGTCGCCA TCCTGGGAAA TGGTGAGAGT
CTGACGGAGG CGTTTCTCAA CATTCTCGAA AACGGCGTGA AATATAACAG GGAATACGGC
ATGTTGGAGA TCACCGTCGT CGGGAGTGGC GCGCAAGCGG TTGTCTCCAT AAAAGACACC
GGCGTCGGTA TGGAAAAGGA GGATCAGGCA CGGATATTCG ACCGATTCTA CCGGGCCGAC
ACTGCACGAA ACTCCGATGG CACCGGGCTC GGCCTCAGTA TAGCCAAAGC GATCATCGAT
GCCCACGGCG GTGCGATCAC GCTGGCAAGC GAACCGGGAA AGGGAGCCAC CTTTACCGTA
ATCTTGCCGG TCAATCACCA CACGGTCGAA AAGGGAATAC TACCGGGGGC CTGA
|
|---|
| Protein sequence | MRGMPNSIQG RLFLSIVTFT SLLFIAVGVF IYREVNGIVI GAVDRTLHSK VQVITGLLHE
EDHTIELELE EVVSGEYSIP RSGHYFKVMM NGKLLAASPS LVNDSFDLGA GAPEPSDEEL
GEDISTSVGP AGEPIRVLRH NLSAFGMTFT VFVAESLSDS LDMISTFRRF LLLVIPSGIV
IASLICLWIA RQSLAPLAIF SGRIETITHK NLGERIDAES ETRELAGLAG SFNKMLDRLQ
KVFESEKRLI ADASHELKTP VSVIKVQCDV VLQRERTPEE YIDAIQTIRT VSDTISMIVR
DLLSLARLDS GVFSQGFAVV SLNACIGRAL DMTKPFAEKR HLQVIAALGD DVAILGNGES
LTEAFLNILE NGVKYNREYG MLEITVVGSG AQAVVSIKDT GVGMEKEDQA RIFDRFYRAD
TARNSDGTGL GLSIAKAIID AHGGAITLAS EPGKGATFTV ILPVNHHTVE KGILPGA
|
|---|
| |