| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1020 |
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| Symbol | |
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| ID | 3738125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1134536 |
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| End bp | 1138150 |
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| Gene Length | 3615 bp |
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| Protein Length | 1204 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637778299 |
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| Product | nitrate oxidoreductase alpha subunit |
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| Protein accession | YP_383987 |
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| Protein GI | 78222240 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5013] Nitrate reductase alpha subunit |
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| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.0604019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATGGA TCAAGGAGTT GACGGATCCG AAGGCGCGGC GATGGGAGGA ATTCTACCGT
AACCGCTGGC AGCACGACCG GGTCGTGCGG AGCACCCATG GCGTCAACTG TACCGGGGGG
TGTTCGTGGC TGGTCTACGT GAAGGAAGGG ATCGTCGCCT GGGAGATGCA GGCCACGGAC
TATCCGCGTC TCGAAGCGGG GCTTCCCCCC TATGAACCCC GCGGCTGCCA GCGGGGGATC
TCCTTTTCCT GGTACCTCTA CAGTCCCCTC CGGATCAAGC ATCCGACGAT CCGGGGAAGC
CTCCTCGACC TCTGGCGCGC GGCAAAGGAG GAGCACAGCG ACCCGCTGGC CGCCTGGGGC
TCCATTGTGG AGGACAGCGA GAAACGGCGC AGTTACCAGC AGGCCCGGGG GAAGGGAGGG
TTTCGCCGGA CTTCCTGGGA CGAGGCCCTG GAGATCACGG CCGCGTCCAC GCTCTATACG
ATCAAGCGGT ATGGCCCGGA CAGGATCGTG GGGTTTTCCC CCATCCCGGC CATGTCCATG
TGCAGCTACG CCGCCGGAAC CAGGCTCCTT TCGCTCCTGG GAGGGGTGGT GCTGAGTTTT
TACGACTGGT ACGCCGATTT GCCTCCCGCC TCCCCCGAGA CCTGGGGGGA GAAGACCGAC
GTGGCGGAGA GCGCCGACTG GTACAACAGC AAGTATATTG TGGTCATGGG GACAAACCTC
TCCATGACGC GCACCCCGGA CGTCCATTTC GTCGCGGAGG CCCGCACCAA CGGCGCCAAG
CTGGTGGTGC TCTCGCCCGA TTTCAGCCAG GTATCGAAAT ACGCCGACTG GTGGCTTCCC
GTCACCGCCG GCCACGACGG GGCCTTCTGG ATGGCGGTCA ACCATGTCAT TCTCAGGGAA
TTTTATGTCG AGCGCCACGT CCCGTACTTT GCCGACTACC TCGCGCGCTA TTCGGACGCT
CCGTTCCTGG TGACGCTCGA CCGGGGGGAT GGAGAACGGT ATGTGCCGGG GCGGCTTCTG
CGGGCGGAAT CCCTGCCCCG TTACCGGAGG GAGGAAAACG GCGAGTGGAA GTTCCTCGTT
TTCGACCGGC TGAGCGGGGA GCCGAGGATG CCCGGGGGGA GCATCGGGTT CCGCTGGCAG
AGGGAAGCGG GGAGGTGGAA CCTGGAGATG AAGGATGGCC TCGACGGTGC GGAGATCGAG
CCCCTTCTCT CCCTTCTCGA CGGGCGGGAC GACGTTCTGC CGGTCAGCAT CACCGATTAC
GCCGGCGGGA CCAGCGTCGC GCGGGGCGTT CCGGTCAGGT ATCTGGAGAC CGCCACCGGG
AGAACTCCCG TCACAACGGT CTTCGACCTC CTCATGGCAA ACTTCGGCGT CGGGCGGGGC
CTGTCCGGAG ACTATCCGGA GGATTACAAT GCCGCCGCGC CAGGAACCCC CGCCTGGCAG
GAGGAGTACA CCGGGGTTGG CCGCGAGACC CTGATCCGCT TTGCCCGGGA GTGGGCCGGC
ACCGCCGAGA GAACCCGGGG GAAATGCACC ATCATCGTCG GTTCCGGCGC AAACCACTGG
TATCACAGCA ACCTCACCTA CCGGACCGGA ATCACCGCCC TCATCCTCTG CGGCTGCGTC
GGGGTGAACG GCGGCGGGCT CAACCACTAC ACCGGCCAGG AGAAGGTAGC TCCCGAGGCG
TCTTGGTCTC TCCTCGCCTT TGCCAAGGAT TGGACAAAGG GGGGGCGGTT CCAGAACACC
CCGTCGTTCC ACTACGTCCA CAGCGACCAA TGGCGCTATG ACGGGGGGGC GGCCGACCCG
CGTCCCGATC CGAAAGGGGG ACCGGCCGGC CGTCACCCCA TGGATCTCCA GGTGGACGCG
GTCCGCATGG GATGGCTCCC CTTTTATCCC CAGTTCGACC GCAACCCGCT CGAACTCGTG
AAGGAGGCGG AGGCCGCGGG GGCGAAGGGT GACGAAGAGA TTATCCGCTG GGTCGTGGAG
GAACTGGAGA AGAAACGGCT CCGCTTCGCC GTGGAAGAGC CGGATGCCCC GGAGAACTGG
CCCCGGCTCT GGCTCATCTG GCGGGGAAAC GCGCTCCTCT CCAGCGCCAA GGGGCACGAA
TACTTCCTCA GGCACTATCT CGGCACCCAT GACAGCAGCA TCGCCGACGA GTGCGCCGCC
GAGCAGGTGG AGAACGCGGC GTGGCAGGAT GCCGCCCCCC GGGGGAAGCT CGATCTCGTC
GTGGACATCA ATTTCCGGAT GGACACCTCG GCCCTCTACT CCGATATCGT CCTCCCCACG
GCCACCTGGT ACGAGAAGGA CGATCTGAAT ACCACGGATC TCCACTCGTT CATACACCCC
CTGTCGGCCG CCGTCCCCCC CTGCTGGGAA TCCCGGAGCG ACTGGGAGAT ATTCAAGGCC
CTGGCGGAGA AGATCTCGGC ACTGGCAAGA ATCCACTTCC CTGAGCCGGT TCGGGACATC
GTTGCCGCGC CCCTTCTCCA CGACACCCCC GGCGAGATCG CCCAGAGCGA GGTGAGGGGG
TGGCATCGGG GGGAGTGCGA GGCGGTTCCC GGCACGACCA TGCCGCGGCT TGCCGTGGTT
GAACGGGATT TTGTTCATCT CTTAGACCGC TTTGTCTCGC TGGGTGAAGA GGTAAAACGG
GAGGGGATCG AAGAGCGGGG ACTCCGGTGG CCGGTTGCCG ATCTCTACGA CGAACTGCTG
GAGAGTGCTC CGGTCCGCGA GTGGGGGGGG AAGCGGTTTC CCTCCCTTGC GGAGGCGGTC
GATGCGGCAA ACGCGATACT CCACTTTGCG CCCGAGACCA ACGGCGAGGT TGCCTGGCGC
GCCTTCCGGT CCCTGGAGGA GAAGACCGGC CTCACCCTCG CCGACCTCGC CTCCGACTAC
CGGGGGACCA GGTATCGCTT CAGCGACCTG GTCAGCCAGC CGCGCCGCAT CCTTACGAGC
CCCTGCTGGT CGGGGGTCAC CAACAACGGC CGCCCCTACG CCCCCTATTG CCTCAACGTG
GAGCGCTTGG TCCCCTGGCG GACCCTGACC GGCCGCCAGC ATTTCTATCT GGATCACGGG
TGGTATCGCG CCTTCGGCGA ACACCTCCCG ACCTTCAAGA CAAGGATCGA CACAGAGGAA
TCGGGCCACC TGGCGAAGAG CAGGCCGGTC GGCAAGGCTC TCATGCTCAA CTGCCTTACC
CCCCACGGCA AGTGGCACAT GCATACGACC TATTACGACA ATCACCGGAT GCTCACCCTG
TCCCGGGGTA TCGAGCCCTT CTGGCTGAAC GACCGGGATG CCGAGGAGAT CGGGGTGAAG
GACAACGAGT GGGTGGAAGT GTACAACGAC AATGGGGTCG TGGTGACCCG GGCCGTGGTA
AGCGCCCGGA TCCCCCGAGG GGTCGGCATC TACTATCACG CGCCGGAGCG GACCATTTCC
GTTCCCCTCT CCCCCCTCAG GGGGAACAGG CGCGCCGGCG GGCACAACAG CCTGACCCGA
GCCCGGTTGA AGCCGGTGCT GATGGCCGGC GGCTATGGCC AGCTCTCCTA CGCCTTCAAT
GCCTGGGGAC CGCCGGGGAG CGACCGGGAC ACCTACGTGT ATGTGCACAA GCTTGAGGGG
GCCCTTCGCT ATTGA
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| Protein sequence | MRWIKELTDP KARRWEEFYR NRWQHDRVVR STHGVNCTGG CSWLVYVKEG IVAWEMQATD
YPRLEAGLPP YEPRGCQRGI SFSWYLYSPL RIKHPTIRGS LLDLWRAAKE EHSDPLAAWG
SIVEDSEKRR SYQQARGKGG FRRTSWDEAL EITAASTLYT IKRYGPDRIV GFSPIPAMSM
CSYAAGTRLL SLLGGVVLSF YDWYADLPPA SPETWGEKTD VAESADWYNS KYIVVMGTNL
SMTRTPDVHF VAEARTNGAK LVVLSPDFSQ VSKYADWWLP VTAGHDGAFW MAVNHVILRE
FYVERHVPYF ADYLARYSDA PFLVTLDRGD GERYVPGRLL RAESLPRYRR EENGEWKFLV
FDRLSGEPRM PGGSIGFRWQ REAGRWNLEM KDGLDGAEIE PLLSLLDGRD DVLPVSITDY
AGGTSVARGV PVRYLETATG RTPVTTVFDL LMANFGVGRG LSGDYPEDYN AAAPGTPAWQ
EEYTGVGRET LIRFAREWAG TAERTRGKCT IIVGSGANHW YHSNLTYRTG ITALILCGCV
GVNGGGLNHY TGQEKVAPEA SWSLLAFAKD WTKGGRFQNT PSFHYVHSDQ WRYDGGAADP
RPDPKGGPAG RHPMDLQVDA VRMGWLPFYP QFDRNPLELV KEAEAAGAKG DEEIIRWVVE
ELEKKRLRFA VEEPDAPENW PRLWLIWRGN ALLSSAKGHE YFLRHYLGTH DSSIADECAA
EQVENAAWQD AAPRGKLDLV VDINFRMDTS ALYSDIVLPT ATWYEKDDLN TTDLHSFIHP
LSAAVPPCWE SRSDWEIFKA LAEKISALAR IHFPEPVRDI VAAPLLHDTP GEIAQSEVRG
WHRGECEAVP GTTMPRLAVV ERDFVHLLDR FVSLGEEVKR EGIEERGLRW PVADLYDELL
ESAPVREWGG KRFPSLAEAV DAANAILHFA PETNGEVAWR AFRSLEEKTG LTLADLASDY
RGTRYRFSDL VSQPRRILTS PCWSGVTNNG RPYAPYCLNV ERLVPWRTLT GRQHFYLDHG
WYRAFGEHLP TFKTRIDTEE SGHLAKSRPV GKALMLNCLT PHGKWHMHTT YYDNHRMLTL
SRGIEPFWLN DRDAEEIGVK DNEWVEVYND NGVVVTRAVV SARIPRGVGI YYHAPERTIS
VPLSPLRGNR RAGGHNSLTR ARLKPVLMAG GYGQLSYAFN AWGPPGSDRD TYVYVHKLEG
ALRY
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