| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1005 |
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| Symbol | |
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| ID | 3740348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 1119656 |
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| End bp | 1121470 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637778284 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_383972 |
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| Protein GI | 78222225 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain
[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGATG CGTCGCGGCA GGGTGAAGAG CACAACCAGC AGGAGCGGGA GATAAAACGC
CTCAACCGTC TCTACGCGGC CCTCAGTCAG GTTAACCATG CCATTGTCCG TATCAGGACA
CGGGAGGAGC TGTTCCGGGA AGTGACCCGT GTCCTGGTTG AGGCCGGCAA GTTCTCCATG
GTCTGGATCG GCCAGCACAA TCCCGCTACC CACGAGATCA AGGTGGCAGC CCAGGAGGGG
GACGAAACCG GTTACCTGAA CGGTATCCGC ATCTATGCCG ACGATCGCCC CGAGGGACGT
GGCCCTTGCG GGACAGCCAT TCGCGAGGGG CACACGTATG TCTGCAATGA TTTCCTGAAC
GATCCGCGCA CGTTGCCGTG GCGAGAGTCA GCGGCCCGAG CGGGATGGCA TTCCGTCGCG
GGGTTTCCCA TCCGCTTGGG TGAGGACGTC TGCTGCGCCC TGATGGTGTA TGACCATGAG
GTGAATTTCT TCGGCGAACA TGAGGTGGCG CTGCTCGAAG AGGTAGCGCA GACCATATCC
TTCGGACTCC TCAGCCTTGA GCGCGAAACC CTGCGAAACC AGTCGGAAGC GGCCCTCCGC
AGGTCAGAGG AAAAATTCAG GAACATCTTC GAGAGTGCGC CCGTTGGCAT CTTCCAGTCC
ACCATTGGTG GCAGGTTTCT GGGAGTCAAC GCAACCCTTG CCGGGATGTT TTGCTACGAT
ACTCCTGAGG AAATAGTCGG CGCCGTGACC GATATTACGT CGCAGCTTTT TGTCGATCCA
ATGCAACGCA CCGAGCTTAT CCGGTCGGTC CTGGAATCGG CTACGTTTGC CCGGAGTGAG
GTCTTGTACC GACGCAAGGA TGGAACGGTA TTTATCGCCA CCCTCTCCAT GAGAGCAGTG
CGTAACGACA ACGGTGACGT CGCTTTCCTT GAGGGGTTTG TGGAGGACAT AACCGAACGG
AAGCATGCGG AAGAGGAGAT ACTCAAACTC AACACTGACC TTGAGCAGCG GGTCAGAAAC
AGGACCGCCG AGCTTGAGGC GGCGAATTCC GCCTTGAAAA AGGAGATAGA GCACCGGAAG
AAGGCGCAGG GAGAGATAAC GCGGTTGAAC CTGGATCTGT TGCGGCAGAA GGTGGCGCTG
GAAACGGTCA ACCGGGAGCT GGAGAGCTTT AGCTATTCGG TCTCCCACGA CCTGCGCGCG
CCGCTGCGCC ATCTCGATGG GTTCAGCAGG ATACTCGAGG AGGAGTGCGC CTCGAAACTG
GACGAGTCGG GGATGGATTG TCTCCAGCGG ATTCGGGCCG CCGCCATGAA GATGGACACC
CTGGTCAACG CCCTCTTGCA ACTGTCGCGA ATGACACGCA CGGAAATAGA CCTGCACCCC
GTCGATGTTT CGGCCATGGC CAGAGAAATC GTGGGGGAGC TTGCCAAATC CGGCCCGGAC
CGGAACGTGA CGGTTGACAT CGAAGATGGT GTCGTGGTCA TGGCCGATCC CCGTCTCCTG
CGGATAGTCA TGGATAATCT TCTCGGTAAT GCGTGGAAAT ACACGTCGAA GAATAATGAC
GCCTGCATAG AGCTCGGGAC CATGGAGGTG ACGGGGAAAC GTGCCTGCTT TGTGCGGGAC
AACGGGGCCG GCTTTGATAT GGCCTATGCG GGGAAGCTGT TCGGGGCATT CCAGCGGCTG
CACAGCGAGG CGGAATTCGA GGGGATCGGG ATCGGGTTGG CCACGGTCCA GCGTATCATC
CACCGCCACG GCGGGAAGGT CTGGGCTGAA GGCCAAGTGG GGAAAGGGGC AACGTTTTAT
TTCATGCTGG AATGA
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| Protein sequence | MEDASRQGEE HNQQEREIKR LNRLYAALSQ VNHAIVRIRT REELFREVTR VLVEAGKFSM
VWIGQHNPAT HEIKVAAQEG DETGYLNGIR IYADDRPEGR GPCGTAIREG HTYVCNDFLN
DPRTLPWRES AARAGWHSVA GFPIRLGEDV CCALMVYDHE VNFFGEHEVA LLEEVAQTIS
FGLLSLERET LRNQSEAALR RSEEKFRNIF ESAPVGIFQS TIGGRFLGVN ATLAGMFCYD
TPEEIVGAVT DITSQLFVDP MQRTELIRSV LESATFARSE VLYRRKDGTV FIATLSMRAV
RNDNGDVAFL EGFVEDITER KHAEEEILKL NTDLEQRVRN RTAELEAANS ALKKEIEHRK
KAQGEITRLN LDLLRQKVAL ETVNRELESF SYSVSHDLRA PLRHLDGFSR ILEEECASKL
DESGMDCLQR IRAAAMKMDT LVNALLQLSR MTRTEIDLHP VDVSAMAREI VGELAKSGPD
RNVTVDIEDG VVVMADPRLL RIVMDNLLGN AWKYTSKNND ACIELGTMEV TGKRACFVRD
NGAGFDMAYA GKLFGAFQRL HSEAEFEGIG IGLATVQRII HRHGGKVWAE GQVGKGATFY
FMLE
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