Gene Gmet_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0954 
Symbol 
ID3738524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1059709 
End bp1060959 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content64% 
IMG OID637778233 
ProductBeta-lactamase 
Protein accessionYP_383921 
Protein GI78222174 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCCC CTGTTTTGCA AGAAAAGCTG GAGTCTGCTA CCAATCGTCT GGTGATGGGG 
TCCGCTATGT GCCGTAAGCT CTTCATTCTG CTCCTCATCC TTTTTACCTC TCTGCCGGTG
TTCGCCGGCG ACACCCCTCT CGCCCCCTTT CCATGGCAGA ATACCGTTTC GCGCCTGATG
GACAAGGCCA TGGCCGACGG GCTCGTCGCC GGGGGGGTGG TGGTCGTGGG AAATCGCCAC
GGCATCGTCT ACGAATCGGC CTTCGGCAGG GTCTCCGGTG AGTCCGGCGC CCTTCCGGTC
TCGACAGAAA CCATTTTCGA TGTGGCATCC CTCACCAAGG TGGTGGCCAC GGCGCCGGTT
GTCATGGGGT TGGTGGAGCA AGGGCGACTT TCCCTTGCCG ATCCCGTCAC CCGCTGGTTT
CCCGAGTTCG CCGGCAAGGG GAAGGATGGG GTCCTGGTGG AGCATCTGCT GACCCATACC
TCGGGGCTCG ACGACTTCCC GCTTTCAGCC TCAAGTCCTC TCCTGAGCGC CCTCGAAGGG
GTTGCCCGCC AGAAGCTCAA GGGGGAACCC GGCCACCGTT TCCGGTACGC CGATATCAAT
TTCATCCTCC TGGGAGAACT GGTACGTCGG GTGACCGGCA CACCGCTGGA CCGCGTCGTG
TCTGAAACCG TCTATGGCCC CCTTGCCATG ACGGCGACCT GTTTCAATCC CGGTCCGGCC
GCTGCCGGCC GCTGCGCGGC AACCCTTGAT GTCGGGGGCG GTCCCCAATT CGGGAAGGTT
CAGGACACCA CGGCCAGGCT CCTTGACGGC GTGGCTGGAC ACGCGGGAAT CTTTACCACG
GCCGGCGACC TGGCCCGCTT TTGCCGCATG ATTCTTGGCG ATGGAGAGCT TGACGGCCAG
CGGGTGCTCG CGGCCCCGAC CCTGCGCCAG ATGGCGGCCC CCCATTTCTC CCGTGGCGGC
ACGGTGCGCC GGGGCCTGGG ATGGGACATC GCGTCACCCT ACTCTTCGCC GAAGGGGAGA
GGGTTTTCCG AAGCCTCCTT CGGGCACACC GGCTATTCGG GAAGCTCCCT CTGGATCGAT
CCCGAGAACG ACGTCTTCGT GGTTCTCCTC TCCTCGCGAC TCGACTACCG GAGCACGCGG
GCATTCTCGA AGCTCAGGAA CGATCTCTCC ACGGTGGCCT TTGCCATGCT CCACCCAGAC
CTTCGGGAAC TGTCCGAAAT CGCCATGTTC AAGGCCCCGC AGGGCCGGTA A
 
Protein sequence
MMAPVLQEKL ESATNRLVMG SAMCRKLFIL LLILFTSLPV FAGDTPLAPF PWQNTVSRLM 
DKAMADGLVA GGVVVVGNRH GIVYESAFGR VSGESGALPV STETIFDVAS LTKVVATAPV
VMGLVEQGRL SLADPVTRWF PEFAGKGKDG VLVEHLLTHT SGLDDFPLSA SSPLLSALEG
VARQKLKGEP GHRFRYADIN FILLGELVRR VTGTPLDRVV SETVYGPLAM TATCFNPGPA
AAGRCAATLD VGGGPQFGKV QDTTARLLDG VAGHAGIFTT AGDLARFCRM ILGDGELDGQ
RVLAAPTLRQ MAAPHFSRGG TVRRGLGWDI ASPYSSPKGR GFSEASFGHT GYSGSSLWID
PENDVFVVLL SSRLDYRSTR AFSKLRNDLS TVAFAMLHPD LRELSEIAMF KAPQGR