| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0928 |
|---|
| Symbol | |
|---|
| ID | 3740084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1021564 |
|---|
| End bp | 1023495 |
|---|
| Gene Length | 1932 bp |
|---|
| Protein Length | 643 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637778207 |
|---|
| Product | peptidoglycan glycosyltransferase |
|---|
| Protein accession | YP_383895 |
|---|
| Protein GI | 78222148 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
|---|
| TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0142765 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 78 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGGA AGGCCTACAT CCGGCAGCCC AATGATCCCC GGAAGCAAAA GCAGATAATC
ATCCTGTCAT GCTTCGTGGC CGCACTCTTC TTTCTGCTCC TGACCCGGCT CTGGTATCTC
CAGATTGTCA AGGCCGAGGA TTTTCAGAAC AAGTCCGAAA GCAACCGGCT CCGCCTTGTT
CCCGTGGCGG CGTCCCGGGG AACCATCTTT GATCGCAACG GCACGGTGCT CGTCAGCAAT
CGCCCCTCGT TCAGCGTTGC CGTTATTCCC CAGGAGGTGA AGGACCGCGA TGCCCTCCTG
GACCAGCTCT CTGCATATCT CGACATCGAC CGGGCCGAGC TCCTGGAAAA ATGGGAAAAG
GGCAAGGGTA GGGCCCGGTA CCATCCCATC GTCCTCGCTT CGGGGATTAC CCGGGACCAG
CTTGAGCTGC TGGAGGAGAA ACGTCTCTGG CTTCCGGGGC TTGAGATTGA GGTCAAGCCG
GTGCGCCAGT ACGAGGCGGG AGTGCTCGCT TCACACCTCC TTGGCTATCT TGGCGAGGTA
TCCGATGATG AGCTGAAGTC CGATGCCTAT GCCGGTTATA ATTCGGGTGA TTACATCGGT
AAGAGCGGTA TTGAGCGCAA CTGGGAGCGG GTTCTCCATG GTAAGGATGG CGGCCGGCAG
ATCGAGGTGG ATGCCCGGGG CAGAATCCTG CGGACTCTCT CCGAGACTCC TCCCACGGTC
GGTTCGAGCC TCGTTCTGAC CATCGACGCG GAACTCCAGA AAAGGACCGA GCAGAGTTTC
GGCGAGCAGG CGGGTGCGGC CGTGGTGATG GATGTCAACA CCGGGGATAT TCTTGCCTTT
GCCAGTAATC CCGATTTCGA CCCCGCCCTC TTCACCGGGC GGATGCCCCC CGAGAAGTGG
AAAGAGTACC TGGAGGACAA ACGCCACCCC CTGGAGAACA AGGCCCTCAA GGGGCAGTAT
CCCCCCGGCT CCACCTTCAA GATCATTACC GCCCTTGCGG GGCTTGAGGA AGGGCTCATC
GACGAGAAAA CCTCGGTCGT CTGTAGAGGC ACCTACACCC TCGGCGCGAG CAAGTTCGGC
TGCTGGGAGC GAAAAGGTCA CGGCACGGTG AATCTGAGGC GTGCGCTCAA GGAGTCGTGC
GATGTCTATT TTTACCAGTT AGGTGAAAGG CTCGGCATCA ACAAGATCGC AGCCTATGCC
CGGGCGCTCG GTATGGGTTC CCCCATGGGG GTCGGGCTGG ACAACGAGAA GGGCGGGCTT
ATCCCCACCT CGGAGTGGAA GGAGAAACGC CACAAGAAGA AATGGCTCCA GGGGGATACG
CTTCCCGCTG CCATTGGCCA GGGGTACGTT CTCATGACGC CTATCCAGCT TGCGTCAATG
ATTGCTACCG TCGCCACCGA CGGTGTTGTC TACCGTCCCC ACCTTGTCAA ACGCATCATC
GACCAGGACG GCAGGGCCCT CCAGGAGTTC AAGCCGGAGG TCATTGCCAG GCCACGAATC
AGTGCCAGGA GTTTCAGACT GGTAAAGGAG GGGCTTTCCG CCGTCGTCAA CGATCCCGGG
GGGACCGGTG CCAGGGCGCG GCTCTACCAG GTGCAGGTAG CGGGTAAGAC CGGTACGTCG
CAGGTGGTGA AGCTCCGTGA CAACAGAGGG GGGATCCCCT ATCAATACCG GGACCATGCC
CTCTTCGTCG CATTTGCCCC TTACGACAAA CCCGAAGTGG CGGTGGCCGT GGTTATTGAG
CATGGCGAGC ACGGCGGCTC CGCAGCGGCT CCTATAGCGG GGAACATCCT CAGGGCCTAT
TTCGAGGGAA AGGGATCCAT CAGGAAACCC GTCAGGAAAG ATGTTCCCAG CGAGACGGGA
GAGCAGGCAG GGCAGGAAAC ACCGGCATCC GAGCAAGGCG GCAGTGCGTC GCAAGGACAG
CAAGAGCAAT GA
|
|---|
| Protein sequence | MNGKAYIRQP NDPRKQKQII ILSCFVAALF FLLLTRLWYL QIVKAEDFQN KSESNRLRLV
PVAASRGTIF DRNGTVLVSN RPSFSVAVIP QEVKDRDALL DQLSAYLDID RAELLEKWEK
GKGRARYHPI VLASGITRDQ LELLEEKRLW LPGLEIEVKP VRQYEAGVLA SHLLGYLGEV
SDDELKSDAY AGYNSGDYIG KSGIERNWER VLHGKDGGRQ IEVDARGRIL RTLSETPPTV
GSSLVLTIDA ELQKRTEQSF GEQAGAAVVM DVNTGDILAF ASNPDFDPAL FTGRMPPEKW
KEYLEDKRHP LENKALKGQY PPGSTFKIIT ALAGLEEGLI DEKTSVVCRG TYTLGASKFG
CWERKGHGTV NLRRALKESC DVYFYQLGER LGINKIAAYA RALGMGSPMG VGLDNEKGGL
IPTSEWKEKR HKKKWLQGDT LPAAIGQGYV LMTPIQLASM IATVATDGVV YRPHLVKRII
DQDGRALQEF KPEVIARPRI SARSFRLVKE GLSAVVNDPG GTGARARLYQ VQVAGKTGTS
QVVKLRDNRG GIPYQYRDHA LFVAFAPYDK PEVAVAVVIE HGEHGGSAAA PIAGNILRAY
FEGKGSIRKP VRKDVPSETG EQAGQETPAS EQGGSASQGQ QEQ
|
|---|
| |