| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0910 |
|---|
| Symbol | |
|---|
| ID | 3738248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1002775 |
|---|
| End bp | 1004970 |
|---|
| Gene Length | 2196 bp |
|---|
| Protein Length | 731 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637778189 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_383877 |
|---|
| Protein GI | 78222130 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01905] doubled CXXCH domain
[TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.688824 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGGTA ACTCAGTACG GAGACTGCTG CTGGGCGTCT GCCTCCTTAC CGTGGCCGCC
ATGCTGTACG GCTGCGGCAG CAGCAAGAAA GAAGGCGCCG GAGCGGGTAC CGCCCAGGCA
ACGCCCACCG GAAACATCCA GTCAAGTGTC CAGAGCGTGA ACACCAGCGG CCCACTGCCG
GTGGTCACCT TTACCCTTTT TGACGAAAAC GGGAATCCGC TCGATCCGAC CTCGCTGCCC
GCCAACAGCG TCCGCTTCAC CATGGCGCAG CTCGGTGCTG ACGGCTACTA CAAAAACTAC
ATTCCCACCA CCACGGCGAC GCAGCCGGGG TACGACTCCG GCGGGACTTT CGCCACCGTG
AGCCCGGGAA TCTATACCTA CACCTTCAAG ACCGACATCA AGGACCCCAC CAAGACCCTG
GGGAACCTGG CGTTCGATCC GACGCTGACC CACACCGTTG CTGCCCAGAT TACCCGGACC
GTGACCTCCG TCAGCGGCAC GTCGTTCCAG CAGGCGAGCA ACCCGTACCT GAACTTCAGG
CCCGACGGCG GTGCCGTGAC TGCCACCCGG GAAGTCGTCT CCATCTCGGC CTGCAACGAG
TGCCACGGCA GCCTCGGCCT CCACGGCGGC GGGCGGCGCG ATATCGCCCT CTGCATCGTC
TGCCACTATC CGGGGGTAAT CGATCCGCAG ACCGGCAACT CCGTCGACAT GAAGGTGCTG
ATCCACAAGA TCCACATGGG AGAAAAACTC CCGAGCGTGG CTCAAGGTGT GGGCTATGCA
ATCATCGGCT TCGGCAACTC CTTCAACAGC TACTCCACGG TCGGCTATCC GTTCATCTCA
GGGGACTCCC GGATCACCGG CACGCCGATC GAATGCACCA AGTGCCACAA GCAGGGTACT
GACTTGGTTG GTCGTACCTT CGGCAAGGAC GTGGACAAGT GGAAGGGTGC CCCGAAGATC
GCCAACTGCA CCACCTGCCA CGACACCACC ACCTTTGACG GAAGTGCCAC GCTCACGGTG
AACAATCCCC GTTCGGGCGA CACCGCCCCC AACCCCGTCA CCATCACATC AGCACCGCAC
TCCGGTGGTA ATGCCACCGA TGCAGTCTGT GCCGGCTGTC ACATCGATTC CACGCCGACC
GATCAGTACA CGCTCTCGGT TGTCGGGGCT CACACTATCC TGGAGAAGGC CCCATCCTAC
TATACCGGCA TCAACTTCCA GATCATCAAC GTTGCCAACG CCACTGCCGG AAACGCGCCG
ACGGTTACCT TCAAGATCAC CAAGGATGAC GGTACCGCCA TCTCTCCAGC AGCTCCGTCG
AGCTTCAGCC TCAAGTTCGG CTACTTCACC CAGCTCGACT ATCTGAACAA CGGCCTTGCC
AACTACGGAC AACCCCTCAG CCAGGCCACG ACAGCGGCAA CGGCCAACGG CGACGGCAGC
TACACCATCT CCTTTGCCAC CCCGATTCCG GTGGCCCTCA CCGCGGGGGT GGGGGTGATC
GGCCTTGAAG GGCGTATCCC CTACACGACT CCAAAGGGGA CCTATAACGT CGGCGGCACT
GCGGTCCAAT GGTATTTCAA CCTTGCCAAC GGTGCCCGGA TAACTGATCA GTCCCTCCAT
CGCCGGAAAG TGGTCTCGGT TGAGAAGTGC AACGCCTGTC ACAGCCGCCT ATCGCTCCAC
GGTGCCAACC GGGTGAACAG CATCGAAGAG TGCGTCATCT GCCACAACCC GAACGCCACC
GACAAAGGGA GACGGGTCGG CGGACCGTTC CTTGACGGAC TTGCCGAGCG GACTATCAAC
CTCAAGGATA TGATTCACTC GATCCATACC GGCGAAGAGC TCAGTGTCAA GCCGTACGTC
GTCTACGGTT TCGGCAATAC GCCCAACATC TTCTCCCACG TCCGCTATCC GAACGACCGG
CGGATCTGCA CCGCTTGCCA CCTCGACGGG ACCTTCGGTC TGCCGCTGCC GACCAACGCC
CTCGGCACCA CCACCGCCAC CGGCGCGAAC CCCCTGGACA ACAGCGATGA CACCAAGATT
CAGCCGATTA CCGCGGCATG TACGTCGTGC CATGACGGCG CCGGCACCGC AACCCATATT
GCGGACAAGG TTGTCGGCGG TGCCGAAACC TGCGTCCAGT GCCACCGTAC CGGACTGCTT
GTGGGGCCGG ACTTCGCCCA CACTCCTGTG CGGTAG
|
|---|
| Protein sequence | MYGNSVRRLL LGVCLLTVAA MLYGCGSSKK EGAGAGTAQA TPTGNIQSSV QSVNTSGPLP
VVTFTLFDEN GNPLDPTSLP ANSVRFTMAQ LGADGYYKNY IPTTTATQPG YDSGGTFATV
SPGIYTYTFK TDIKDPTKTL GNLAFDPTLT HTVAAQITRT VTSVSGTSFQ QASNPYLNFR
PDGGAVTATR EVVSISACNE CHGSLGLHGG GRRDIALCIV CHYPGVIDPQ TGNSVDMKVL
IHKIHMGEKL PSVAQGVGYA IIGFGNSFNS YSTVGYPFIS GDSRITGTPI ECTKCHKQGT
DLVGRTFGKD VDKWKGAPKI ANCTTCHDTT TFDGSATLTV NNPRSGDTAP NPVTITSAPH
SGGNATDAVC AGCHIDSTPT DQYTLSVVGA HTILEKAPSY YTGINFQIIN VANATAGNAP
TVTFKITKDD GTAISPAAPS SFSLKFGYFT QLDYLNNGLA NYGQPLSQAT TAATANGDGS
YTISFATPIP VALTAGVGVI GLEGRIPYTT PKGTYNVGGT AVQWYFNLAN GARITDQSLH
RRKVVSVEKC NACHSRLSLH GANRVNSIEE CVICHNPNAT DKGRRVGGPF LDGLAERTIN
LKDMIHSIHT GEELSVKPYV VYGFGNTPNI FSHVRYPNDR RICTACHLDG TFGLPLPTNA
LGTTTATGAN PLDNSDDTKI QPITAACTSC HDGAGTATHI ADKVVGGAET CVQCHRTGLL
VGPDFAHTPV R
|
|---|
| |