Gene Gmet_0906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0906 
Symbol 
ID3738244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp998686 
End bp999846 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content67% 
IMG OID637778185 
Productmajor facilitator transporter 
Protein accessionYP_383873 
Protein GI78222126 
COG category[R] General function prediction only 
COG ID[COG2270] Permeases of the major facilitator superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0319355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGAG GCATCTCCGG CAATGTCCTG ATTTTCGGGC TGGTAAGCTT CCTCACCGAT 
GTGTCGAGCG AGATGATCTA TCCGCTCCTC CCCCTCTTCC TCACGACGGT CCTCGGGGCG
GGGCCGGCGT TCCTCGGGCT CATCGAGGGG GTGGCCGAGT CGACGGCAGC GTTCCTGAAG
CTGGTGTCAG GGATCCTTTC CGACCGCGTC CGGAGCCGCA AGGGGCTGGT GCTCGGCGGG
TACGCCCTGT CGAGCCTTGC CCGTCCCCTG GTGGCGGCCG CCACGGCTCC ATCGGCGATC
CTCGCCATCC GTTTCGCCGA CCGGGTGGGG AAGGGGATAC GCACCTCGCC CCGCGACGCG
CTCATTGCCG ATTCCACCGA TCCCGCCTTC CGGGGCAAGG CCTTCGGTTT CCACCGGGCC
ATGGACCACG CCGGAGCCCT CGTCGGTCCC CTCATCGCCA CGCTTCTCCT TGCCTGGTTC
GTGAAGGATC TGCGGACCGT TTTCTGGCTC GCGGCCATCC CGGGGTTCCT GGCCGTTGTC
CTCATCATCT GGAAGGTGCG GGAGACGGCG CGGGTCCGCA CCGGCGACGG CACCTTTCTT
CGCATCGTCC CCCATGGCGA TCTCCGGCGA TTCCTCCTGA TTCTTTTTCT CTTTACCCTG
GGGAACTCAT CCGACGCCTT CCTCCTCCTG AGGGCCGGCG AACTGGGTGT CACCCCAGCC
CGCATTCCCC TCCTCTGGGC CTTCTTCCAT CTCGTCAAAA TGGCCGGGTC CACTCCCTTC
GGCGCCCTGT CGGACCGGAT CGGACGCCGC GGCGTGATCG TCGTGGGGTG GGGGGTCTAT
GCCCTTTCCT ACGGAGGATT CGCCCTGGCC GAAACCGAGG TGGCCTGCTG GCTTCTCTTC
GCCTTCTACG GGCTCTTTTA CGCCATGACC GAAGGTGCCG AGAAGGCGCT CCTGGCCGAC
CTCGCCCCAT CCCGGGAGCG GGGGAGCGCC TTTGGCTGGT ACAATTTCGC CGTGGGGGCG
GGGGCGCTTC CGGCAAGCCT TCTGTTCGGC GCCGTCTGGG AGAAGGCGGG AAGAGTGGCT
GCCTTCGGCT TCGGGGCGGC GTTGGCGGCC CTTGCGGCCG TGCTGCTCCT CTCCCTCGTG
AGGGCCCCGG CGCGGGAATG A
 
Protein sequence
MFRGISGNVL IFGLVSFLTD VSSEMIYPLL PLFLTTVLGA GPAFLGLIEG VAESTAAFLK 
LVSGILSDRV RSRKGLVLGG YALSSLARPL VAAATAPSAI LAIRFADRVG KGIRTSPRDA
LIADSTDPAF RGKAFGFHRA MDHAGALVGP LIATLLLAWF VKDLRTVFWL AAIPGFLAVV
LIIWKVRETA RVRTGDGTFL RIVPHGDLRR FLLILFLFTL GNSSDAFLLL RAGELGVTPA
RIPLLWAFFH LVKMAGSTPF GALSDRIGRR GVIVVGWGVY ALSYGGFALA ETEVACWLLF
AFYGLFYAMT EGAEKALLAD LAPSRERGSA FGWYNFAVGA GALPASLLFG AVWEKAGRVA
AFGFGAALAA LAAVLLLSLV RAPARE