Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0905 |
Symbol | |
ID | 3738243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 997089 |
End bp | 998564 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637778184 |
Product | AAA ATPase, central region |
Protein accession | YP_383872 |
Protein GI | 78222125 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 75 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.00241142 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGGAAAATC TCACCGTAAC AGGTCTCGTG CGCCTCATCG GAGCCGGGGC CACCATGATC TACGTGGTGA CCGACAACGA ACGGCGGACC GAGCAGATCG CCACCCAGGC GGCGGCCCGG CTCAAGGGGG CCGGCTCTCC CTACGTCTGG ACCTGCACCG AGGGCTTCAG CCGCGACGGC GCCGTGGTGG AGGGGATCGA CGATCCGGTG GCGGCCGTCG GTTTCGCCTT GGCCCAGCCC GGACCGCTTC TCTTTCTCTT CAAGGACCTT CCCTGGTTTT GGGGAGACAA CCCCTATCTC ATCCGTGCCC TGAAGGATTT CGCCATGCGC GCCAAGGCGA AGGCAATCGT GGTCCTCGGC CAGCAGGAGG GGATTCCGGC GGCGCTTCGC GAGGAGTTTG TCATCCTCCA GCAGGGGCTT CCGGCCATGG AGGAGATCAA GGCCTTCTTC GAGCAGGCGA GGGCGCGGGA CCCCCAGTTG GCCCAGGCGT GCCAGGAGCG GCCCGGCCTT CTGAACGATC TGGTGGTGGC GGCCCAGGGG CTCGACCTTC TGGATGTGGA GCGGGGAATG CGGGGAGCCC GTGCCGCCGG GGAGGCGGGG GGCGAGGGGC TGGTCCGCTC CATTTTCGAG ACCAAGCGGG CCATCATCCG CACGGGCGGC ATCATGGAGT TCGTGGCGAA CGACGTCACC CCCGACCAGG TGGGGGGGAT GGAGAACCTG AAACAGTGGA TGGCCCGGCG GGAGCAGGCC TTCGGCCTGG AGGGTATCTC CTCGGGGGCG AACCTCCCCA AGGGGGTGCT CATGATGGGG ATCGCCGGGT GCGGCAAGTC GCTCTTTGTG AAGGCCATTG CGGCCACGTG GCGGCTGCCG CTCATCCGGC TCGACATGGC GGCGGTCTAC GACGGGAGCT ACGGCACCCC CGAGTCGAGC CTCCGCAAGG CCTTCAGGAC TGCCGAGGCG GTGGCCCCCT GTGTCCTCTG GATCGACGAG ATCGAGGCAG GGATCTCCAC CCAGGGGTTC AAGGCGGAAG GGGGGCCGGC GTCCCGCATC CTCGGCTCGT TCCTCACCTG GATGCAGGAG AAGCGGGCCC CGGTCTTCGT GGCCGCCACC GCCAACGCCA TCGAGATGCT CCCGGCCGAG ATCATCCGCA AGGGGCGCTT CGACGAGATC TTCTACATCG GGCTCCCGGA AACGAAGGGG CGGGAGGAGA TCTTCCGCAT TCACCTGACG CGCCGGAAGA TTGGCCTGAG CGCCTTCGAC GTGCCGCTCC TGGCCGGTTC CACCAAGGGG TTCTCCGGGG CCGAGATCGA GCAGGCGGTA CAGGCGGCCG CCTTCGAGGC CCTTACCGGC AAGCGCCCCA TGACCCAGCA GGACCTCATG GCCGCCATCA GCCGCACGGT TCCCCTCTCC GTCACCATGG CGGAGCAGAT CAAGAAGATC GAGGCCTGGG CCTTCAAACG GGCGGTTCCG GCGTAA
|
Protein sequence | MENLTVTGLV RLIGAGATMI YVVTDNERRT EQIATQAAAR LKGAGSPYVW TCTEGFSRDG AVVEGIDDPV AAVGFALAQP GPLLFLFKDL PWFWGDNPYL IRALKDFAMR AKAKAIVVLG QQEGIPAALR EEFVILQQGL PAMEEIKAFF EQARARDPQL AQACQERPGL LNDLVVAAQG LDLLDVERGM RGARAAGEAG GEGLVRSIFE TKRAIIRTGG IMEFVANDVT PDQVGGMENL KQWMARREQA FGLEGISSGA NLPKGVLMMG IAGCGKSLFV KAIAATWRLP LIRLDMAAVY DGSYGTPESS LRKAFRTAEA VAPCVLWIDE IEAGISTQGF KAEGGPASRI LGSFLTWMQE KRAPVFVAAT ANAIEMLPAE IIRKGRFDEI FYIGLPETKG REEIFRIHLT RRKIGLSAFD VPLLAGSTKG FSGAEIEQAV QAAAFEALTG KRPMTQQDLM AAISRTVPLS VTMAEQIKKI EAWAFKRAVP A
|
| |