| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0904 |
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| Symbol | |
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| ID | 3738242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 995010 |
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| End bp | 996917 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637778183 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_383871 |
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| Protein GI | 78222124 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.000284288 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACGCT GGTCGATCAA CGACTCCGCA AAGATTTACA ACCTCCCCAA CTGGGGGGCT
GACCTCTTCT CCATCAACAA GAAGGGGAAC GTCTGCGTAC ACCCTTCCCC CACGTCGAAG
CACTCCATCG ACCTGCGGGC GCTGGTGGAC GATCTCATCA AGCGCAAGAT CAAGCCCCCG
ATCCTGCTAC GGTTCATGGA TGTCCTCCAG GGGCGGATCG CTGCCATCAA CCGCGCCTTC
AAGTACGCCA TCGATGAGAA CGACTACCCG TCCACGTACC AGACCTTCTA CCCCATCAAG
GTGAACCAGC AGCGGCAGGT GGTGGAGGCC ATCGCCAAGT TCGGCAAGCG TTACAACATC
GGCATCGAGG TGGGCTCCAA GCCGGAGCTG GTGATCGGCA TCTCCTTCGC CACGGGGAAC
GGCATCCCGA TCATATGCAA CGGCTACAAG GACAAGGAGT ACATCGAGAC GGTCCTCTAC
GCCACCAAGA TCGGCTACGA CATCACCATC GTCGTGGAGA AGATGTTCGA GCTGGAGAAG
ATCATCGCCC TCTCCAAAAA GACCGGCATC AAGCCCAAGC TCGGCATTCG GGTGAAGCTC
TCCTCCAAGG GGACCGGCAA ATGGGCCACC TCCGGCGGCG AGGACGCCAA GTTCGGCCTC
CGGATGTCGG AGATCATCGC TGCCATCGGG CTTCTGGAGC AGAACGAACT CCTTGATAGC
GTGAAACTGA TCCACTTCCA CATCGGGAGC CAGATCACCA AGATCGACAA GATCAAGAGC
GCCCTCATCG AGGGGACCCG GGTCTACGCC GAGATGCGGA AGCTGGGGGT CGGCATAGAG
TACGTGGACA TCGGCGGCGG CCTGGGGGTC GACTACGACG GCTCCAAGTC CAGCTACTTC
TCCAGCGTCA ACTACTCCAT CGAGGAGTAC GCCAACGACG TCATCTACCA AATCAAAAAC
ATCTGCGAGG ACGCCGGTGT CGAATGCCCC AATATCATCT CCGAATCGGG CCGGGCCACG
GCGGCCCACT ACTCGGTGCT GGTGACGAAC CTCCTCAACA CCAATACCCA GAACCTGATG
CCGGACTTTG AGGAAACCCT CAACGGCGCT GAGAAGCTGG CCCCCACGGT CAAGAAGCTG
GTGGACATCT ACAAGAGCAT TGACCGCTAT TCCCTTCGGG AGGACTACCA CGACACGGTA
CAACTCATCC AGGAGGCGGT GAGCCTTTTC AGTCTGGGGT ACCTGACCCT TGCCGAACGG
GCCATGGCCG AGTGGCTCCA CGGCAAGATC CTGCGCAAGA TCAACGGCAT CGTGGAGAAG
ATTAAACCGA TCCCCGAGGA GCTCCAGAAC TTCCAGTTGA GCCTGCGGCA GACCTACTTT
GCCAACTTCT CGTTGTTCCA GTCGATTCCC GACTCCTGGG CCATCGACCA GCTCTTTCCC
ATCGTGCCGA TTCAGCGGCT CAACCAGAAG CCCGACGTCA TGGCCTCCAT CGCCGACATA
ACCTGCGACT CCGACGGGGA GATAACCAGC TTCGTCGGCG AGAACGGCCG GACGAAGTAT
CTGCCGCTCC ACAAGATCCG CAAGGACGAG GACTACTTCG TGGGCTTCTT CCTCATCGGC
GCCTACCAGG AGATCCTGGG GGACATGCAC AACCTCTTCG GCGACACCAA CGCCGTGCAT
GTCACTTTCA ACAAGAAGAC CGGCTACAAG ATCGACACGG TCATCAACGG CGACGCCACG
TGGGAGAGCC TGAAATACGT CCAGTACAAG GGACCGGAGA TCCTCAAACA CGTCCGCGAC
ACCATGGAGA AGGATGTGGC CCTGCGCAAG GTCTCCATCG AGGAGAGCAG CCACTTCCTG
GAACTGCTGG ACCGGACCCT CCTGGGGTAT ACGTACCTGG GGGAATGA
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| Protein sequence | MERWSINDSA KIYNLPNWGA DLFSINKKGN VCVHPSPTSK HSIDLRALVD DLIKRKIKPP
ILLRFMDVLQ GRIAAINRAF KYAIDENDYP STYQTFYPIK VNQQRQVVEA IAKFGKRYNI
GIEVGSKPEL VIGISFATGN GIPIICNGYK DKEYIETVLY ATKIGYDITI VVEKMFELEK
IIALSKKTGI KPKLGIRVKL SSKGTGKWAT SGGEDAKFGL RMSEIIAAIG LLEQNELLDS
VKLIHFHIGS QITKIDKIKS ALIEGTRVYA EMRKLGVGIE YVDIGGGLGV DYDGSKSSYF
SSVNYSIEEY ANDVIYQIKN ICEDAGVECP NIISESGRAT AAHYSVLVTN LLNTNTQNLM
PDFEETLNGA EKLAPTVKKL VDIYKSIDRY SLREDYHDTV QLIQEAVSLF SLGYLTLAER
AMAEWLHGKI LRKINGIVEK IKPIPEELQN FQLSLRQTYF ANFSLFQSIP DSWAIDQLFP
IVPIQRLNQK PDVMASIADI TCDSDGEITS FVGENGRTKY LPLHKIRKDE DYFVGFFLIG
AYQEILGDMH NLFGDTNAVH VTFNKKTGYK IDTVINGDAT WESLKYVQYK GPEILKHVRD
TMEKDVALRK VSIEESSHFL ELLDRTLLGY TYLGE
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