| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0903 |
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| Symbol | |
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| ID | 3738241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 993566 |
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| End bp | 994720 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637778182 |
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| Product | carboxynorspermidine decarboxylase |
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| Protein accession | YP_383870 |
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| Protein GI | 78222123 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01047] carboxynorspermidine decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 70 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0000370822 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGACCGGCA TCGACATTGA AAAAATCCTG AAGCTGGCCC CGTCCCCCGC CTACGTGGTG
GACCTGGGGC GGCTGCGCCA CAACCTGGCC ATCCTCGACG ATGTCCAGAA GCGTAGCGGC
GCTAAGATCC TCATGGCCTT GAAGGCCTTC GCCATGTGGA GCGTTTTTCC CATCATCCGG
GAGACCCTCC AGGGGGTCTG CGCCAGCTCG CCGTGGGAGG CCCGCCTGGG TCGGGAGGAG
TTCGGACGGG AGGTCCACAG CTTTGCCGCC GCCTTCAAGG AGAGCGACGT GGTGGAGCTG
CTTGCCGTCT CCAACCATCT GGTCTTCAAC TCCTTCAACC AGCTGGAGCG GTTTCGCCCC
CTGTGGGAGA AGGAGCGGGG GCGGGTGTCG GTGGGGTTGC GGGTGAACCC CGAGCATTCC
GAAGGGCATA CCCCCATCTA CGACCCCTGC GCCCCCAAGT CGCGGCTCGG CATCCCCCGC
GCTGCGTTTG AGGGGAAGTC GCTTGCCGGA GTCGAGGGGC TCCACTTCCA CACCCTCTGC
GAACAGCTCT TCGAGCCTCT GGAGCGGACC GCGAAGGTCT TCGAGGAGAA GTTCGGGCCG
CTGCTCCACG GCATGAAGTG GCTGAACCTC GGTGGCGGGC ACCACATCAC CCGCGCGGGG
TACGACATCG ACGCCCTGGT GGAGCTGGTC AAATACTTCA AGGGGAAGTA CGGCGTTGAG
GTCTACCTGG AGCCGGGGGA GGCCATCGCC ATCGGCACCG GCGTCCTCGT GGGGGAGGTG
CTGGACGTGG TGCGCAACGA GATGGAGATC GCCATCCTCG ATGTCTCCGC CACCTGCCAC
ATGCCAGACG TGCTGGAGAT GCCCTACCGC CCCGGCATCA CCGGCGGCTT CGACCCCGGC
GAGAAGGCTC ACACCTACCG GCTTGCCGGG CCGTCGTGCC TGGCCGGGGA CGTCATCGGC
GACTGGTCCT TTGACAAGCC CCTGAAACCG GGGGACCGGC TCGTGTTCGA GGACATGTCC
CACTACACCA TGGTGAAGAC CACCACCTTT AACGGCATCC AGCATCCAGC CATCTGTACC
TTTGAGCCGG AAACCGGGGA GCTCAGGGTG GTGCGGCGTT TCGGGTACGA GGATTTCAAG
AGCAGATTGT CTTAA
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| Protein sequence | MTGIDIEKIL KLAPSPAYVV DLGRLRHNLA ILDDVQKRSG AKILMALKAF AMWSVFPIIR
ETLQGVCASS PWEARLGREE FGREVHSFAA AFKESDVVEL LAVSNHLVFN SFNQLERFRP
LWEKERGRVS VGLRVNPEHS EGHTPIYDPC APKSRLGIPR AAFEGKSLAG VEGLHFHTLC
EQLFEPLERT AKVFEEKFGP LLHGMKWLNL GGGHHITRAG YDIDALVELV KYFKGKYGVE
VYLEPGEAIA IGTGVLVGEV LDVVRNEMEI AILDVSATCH MPDVLEMPYR PGITGGFDPG
EKAHTYRLAG PSCLAGDVIG DWSFDKPLKP GDRLVFEDMS HYTMVKTTTF NGIQHPAICT
FEPETGELRV VRRFGYEDFK SRLS
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