| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0890 |
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| Symbol | |
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| ID | 3738849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 980811 |
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| End bp | 981887 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637778169 |
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| Product | SMF protein |
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| Protein accession | YP_383857 |
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| Protein GI | 78222110 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000000185705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000000000000633505 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATCATT ATCACTGGTT TGCCCTCAAA TCCGTCCCCC TCGTGGGGAA CGTCCTCTTC
CGGCGGCTCC TGGAGCGCTT CGGCTCCCCC GAGGCGGTCT TCGGAGCGTC CGATGTCGAT
CTCCGTTCCG TCAAGGGGGT GAGTCCGGCG GTGGTGGCCT CCCTCCGAAG CCATGACCCG
CACCCCTTTG CCGACCGGGA GTGTGCGGCG GTCAGGCGCA CGGGGTGCCG CATCGTAACC
ATCCTCGATG ATGAGTATCC ACCGCTCCTG CGGGAGATCG CCGACCCGCC CCCCTTCCTT
TATGTGCGGG GAAGCCTCGC CGGTATCGGC ACTTCCGTGG CGGTGGTGGG TTCCCGTCGG
GCCTCTGCCT ATGGCAGGAC GGTGACCGAG CGCATGGCCG AGGAGCTTGC CCGGAACGGT
GTCACCGTGA TTTCCGGCCT GGCTCGCGGG GTCGACACCG CGGCCCACCG GGGAGCCCTG
AAAGGGGATG GGACAACCGT CGGGGTGCTC GGGTGCGGCG TGGACGTGGT CTATCCGGCC
GAGAACCGGC AGCTCTTCCG AGAGATGGCC GAACAGGGAG CGGTGGTGTC CGAGTTCCCC
CTGGGGACCG CCCCCCTGGC CGAGAACTTC CCCCGTCGAA ACCGGATCAT CAGCGGCATC
TCCCACGGGG TCCTCGTGGT GGAGGCGGCG GAGCGGAGCG GCTCCCTGGT CACGGCCCGC
ATCGCCCTCG ACCAGGGGCG CGATGTCTAC GCCATTCCCG GCAACATCAC CAGCGACGGG
AGCCGGGGGG CTAACCGCCT CATCCGCGAG GGGGCGAAGC TGGTGGAAAG CGTGGAGGAT
ATCCTGGAAG AACTCCCCGG GGGAAGGGTG GCCCGCAGGG GAGTGCCGGC GCCGGCGCCC
GACCTCCCGC CTGCCGAGGC GGCGGTCTTT GCGCTCCTGG CCCCTGAGCC GCTCCATATC
GATGAGATCA TTGCCAAAAG CGCGTTGACA GTGGGGGAGC TTTCGGCTAT GTTGTTGCGC
CTGGAACTCA AGGGGGCCGT AACTCAGCTT CCCGGCAAGT ATTTTTGCAC AAATTGA
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| Protein sequence | MDHYHWFALK SVPLVGNVLF RRLLERFGSP EAVFGASDVD LRSVKGVSPA VVASLRSHDP
HPFADRECAA VRRTGCRIVT ILDDEYPPLL REIADPPPFL YVRGSLAGIG TSVAVVGSRR
ASAYGRTVTE RMAEELARNG VTVISGLARG VDTAAHRGAL KGDGTTVGVL GCGVDVVYPA
ENRQLFREMA EQGAVVSEFP LGTAPLAENF PRRNRIISGI SHGVLVVEAA ERSGSLVTAR
IALDQGRDVY AIPGNITSDG SRGANRLIRE GAKLVESVED ILEELPGGRV ARRGVPAPAP
DLPPAEAAVF ALLAPEPLHI DEIIAKSALT VGELSAMLLR LELKGAVTQL PGKYFCTN
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