| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0889 |
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| Symbol | |
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| ID | 3738848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 979757 |
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| End bp | 980758 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637778168 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_383856 |
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| Protein GI | 78222109 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0000030411 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00000000000323717 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAGAG TGTTCTCTAT CGGCTGCATG CTCCTCGCCG GAGCGCTTCT CACCGTCGGC
ACCGTCCGGG CCGCGTCCGA AGAGCCGACA ATCTACGTCA TCCAGAAGGG GGACACCCTC
TGGGGGCTCT CGGACCGCTT CCTCAAGGAT CCCTACTACT GGCCCAACCT CTGGGCCAGG
AACCCCGCCA TCGGCAATCC CCACTTTATC TATCCCGGCC AGCGGGTCCG CGTCTACCCG
GACCGGATCG AGATCGAACC CCGCACTGTC TCCCCCGGCA CCCCCGCTGT CCAGCGCCCC
TCCGAGGAGC CGGTTGCCGA GCGGAGCTTC CTGGTAAGCG GCAGCGAAGG GTTCCTGATG
GAAAAGGGGC TCAACCCCGC CGGCCGCATC ATTACCACCA GCCAGAACCG CCAGATCGTG
GGTGAGGACG ACATTGTCTA CACCGATATC GGCTCTGTCC ACGGGGCCAA GGAGGGGGAC
CGGTTCTCCA TCTACAAGAA GCTTGACGCC GTGAGCCATC CCGTCTCCAA CGTGATTCTC
GGCGAGAAGG TGATCCCCCT CGGCACGCTG CAGCTTACCG AGGTGGAGGA GAAGGTTTCC
AAGGCCATCA TTACCAAATC CTACCGGGAA ATCGGTCCCG GCTCCATCCT CCTTCCCTAT
CGGGACAAGC GCCGGCAGAT TTCCCTTAAG GCTGCCGACC ACGACCTCTC TGGCTACATC
GTCGAGACCC AGAGTGGCAA CAATGCAATC GGCGAGGGAG ACATCGCCTT TATCGACTTG
GGGAAAAAGC AGGGGATAGA GCCGGGATAC TTCCTCTATA TCCTGCGGGA CGTGGTCCCC
GACCAGCAGT ATGCGGACAT CTCCGTTGAG AAGCTCCCCC CCGAGGTGGT CGGTGCCCTC
GTGGTGGTGC AGTCGGGGGA GAACACCTCC ACGGGGCTTG TGGTGAAAAG CATCGACACC
ATCTACCGGG GGGACCGGGT AGAGGCCAGG ACAAACAGAT AA
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| Protein sequence | MKRVFSIGCM LLAGALLTVG TVRAASEEPT IYVIQKGDTL WGLSDRFLKD PYYWPNLWAR
NPAIGNPHFI YPGQRVRVYP DRIEIEPRTV SPGTPAVQRP SEEPVAERSF LVSGSEGFLM
EKGLNPAGRI ITTSQNRQIV GEDDIVYTDI GSVHGAKEGD RFSIYKKLDA VSHPVSNVIL
GEKVIPLGTL QLTEVEEKVS KAIITKSYRE IGPGSILLPY RDKRRQISLK AADHDLSGYI
VETQSGNNAI GEGDIAFIDL GKKQGIEPGY FLYILRDVVP DQQYADISVE KLPPEVVGAL
VVVQSGENTS TGLVVKSIDT IYRGDRVEAR TNR
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