Gene Gmet_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0875 
Symbol 
ID3739305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp964222 
End bp965328 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content61% 
IMG OID637778154 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_383842 
Protein GI78222095 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.0021337 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATGCGG AACTGGTGCG GGCGAAGCTT GCTTCAGAGG AAATTTCGTG CACCATAACG 
GTTGCACCTG ATGGGAAACA GTTCGCCCGC GTCCTGGAGG AGAGTGCAGA CTGCTTCGAC
CTCATACTGG CGGATATGAG CATCCCCGGC TACGATGGGG TCGCAGCCCT GAAACTGGCT
CTGGAACAGT GCCCGGACAC CCCATTCATC GTCATTTCCG GAACAGTGGG CGAGGAACGG
GCCGTAGAGA CCCTCCGCAA GGGGGCGACG GACTTCATTC TGAAGGGTAA CATGGGACGC
CTTGGGTCGG CGATACGACG CGCCCTCAAG GAAGCGGAGG AACATTGCAA TCGCCAGCGG
GCCGAGGAGT CCCTGCGCCG CCTTAACGCG GAACTGGAGC AGCGGGTCCA GGAGCGAACC
GCCCAGTTGG AAGCGACCAA TCAGGAACTA CAGGCCTTCA ACTTCTCAGT CTCCCACGAC
CTCCGGGCAC CCCTTACCAT CATCGACGGT TTCAGCAAGG CGATCCTGGA GGATTTCGGC
ACCGATCTTC CCTCCGAGGC GCTGGACTAT CTCCAGCGGA TCCAGAAAGC GGGCCAGCGG
ATGACCAGGC TCATCGATGC GCTCCTGAAC CTGTCGAGAC TTGGCCGAGA GCCCATTACC
CCGGAACAGA CCGACCTCTC CGCCATCGCC GGCACCATCG AGCAGGAACT CCGCTACATC
CACCCGGACC GCACCGGGGT CACCATCCGG ATCACCGACG GCATCACCGT CCGCGGCGAC
CGGCGGCTCC TGCGGTCGGT CGTGGAAAAT CTTTTGAGCA ATGCCTGGAA ATATACGGCA
AGGCGGGAAC AGGCCGAGAT CGAATTCGGC GTCATGAAAC AGGGGGAGAA ACCGGTTTAC
TTTGTCCGGG ACAACGGCGC CGGCTTCGAT ATGCGCTACG CCGGGCAGCT TTTCACCCCT
TTCCAGCGTA TGCACCGGTC TGAGGAATTC GAAGGGAACG GCATCGGGCT CGCCACGGTC
CAGCGGATCG TTCACCGCCA CGGGGGAAGA ATCTGGGCCG AAGCAGAAGA GGGCAAGGGT
GCAACCTTCT TCTTTACCCT CGGATGA
 
Protein sequence
MDAELVRAKL ASEEISCTIT VAPDGKQFAR VLEESADCFD LILADMSIPG YDGVAALKLA 
LEQCPDTPFI VISGTVGEER AVETLRKGAT DFILKGNMGR LGSAIRRALK EAEEHCNRQR
AEESLRRLNA ELEQRVQERT AQLEATNQEL QAFNFSVSHD LRAPLTIIDG FSKAILEDFG
TDLPSEALDY LQRIQKAGQR MTRLIDALLN LSRLGREPIT PEQTDLSAIA GTIEQELRYI
HPDRTGVTIR ITDGITVRGD RRLLRSVVEN LLSNAWKYTA RREQAEIEFG VMKQGEKPVY
FVRDNGAGFD MRYAGQLFTP FQRMHRSEEF EGNGIGLATV QRIVHRHGGR IWAEAEEGKG
ATFFFTLG