| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0873 |
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| Symbol | mnmA |
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| ID | 3739303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 961819 |
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| End bp | 962925 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637778152 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_383840 |
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| Protein GI | 78222093 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.003729 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGGAAA AAGCGAGAAA ACGGATTGTC GTCGCCATGA GCGGCGGGGT CGATTCGTCG
GTGACGGCGG CGCTCCTGAA GGAGGAGGGG CACGAGGTCA TCGGCATCTC CATGCAGGTC
TGGGATTACT CCAAATTCAG CGCCCCGGAG GGAGAGAAGT TCGACACCTG CTGCTCCCTG
GATGACATCC ACGACGCCCG CCGGGTGGCG GAGCAGATCG GGATCCCCTT CTACGTGGTG
AATTTCGAGG AGGAGTTCCA GCGGCTGGTC ATTGACGACT TTGTGGACGA GTATTTTCGG
GGGCGAACCC CCAACCCCTG CGTGCGGTGC AACCAGCGGG TGAAGTTTGA GCTCTTGCTC
CGGAAGGCCC GGGAGCTGGG AGCCGACCTC CTGGCCACTG GCCACTACGC CCGGATCGAG
CGTGGTGGTG ACGGTCTGTT CCATCTCCTG CGGGGGGATG ATCCCGGCAA GGACCAGAGC
TACTTCCTCT TCACCCTCAC CCAGGAGCAG CTTGCCCGGG TCACCTTCCC CTTGGGGGGG
ATGACTAAGC CGGAAGTGAG GCAGCTGGCG ACCCGGTTCG GCCTGCGGGT GGCAGAGAAG
GGGGAGAGCC AGGAGATCTG CTTTGTCCCG GACAACGATT ACGTCCGGTT TCTGGAGGAT
GAGCGGGGCG CAGGTCAACT GGTCGGGGAG ATTGTCGACC GGGCTGGCAC CGTACTGGGA
CACCACGAAG GGACCTACCG CTACACCGTG GGGCAGCGCC GGGGGCTCGG CATTGCCCAT
CCCCATCCCC TCTACGTGGT GGGGGTCGAT GCGGAGCGGC GGCAGGTGAT TGTCGGGCCC
AAGGAGGAAC TCCTGGCCCC GGGGCTCGTG GCCACGGATG TGACGTGGGT CATTGCCCTG
GCAACGGAGA CCCTGGAGGC AGCGTGCAAG ATCCGCTACC GGCACCATCC CGTGCCCTGC
ACGGTGACGG TTCTTGCCGG CAACCGGGCA CAGGTCCGGT TCCGGGAGCC GGAGAAGTCG
GTCACGCCGG GGCAGGCGGT GGTCTTCTAC CACGGTGACG AGGTGCTCGG TGGCGGTTGG
ATCGATGCGG CGATGACCGA GGGGTAG
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| Protein sequence | MTEKARKRIV VAMSGGVDSS VTAALLKEEG HEVIGISMQV WDYSKFSAPE GEKFDTCCSL
DDIHDARRVA EQIGIPFYVV NFEEEFQRLV IDDFVDEYFR GRTPNPCVRC NQRVKFELLL
RKARELGADL LATGHYARIE RGGDGLFHLL RGDDPGKDQS YFLFTLTQEQ LARVTFPLGG
MTKPEVRQLA TRFGLRVAEK GESQEICFVP DNDYVRFLED ERGAGQLVGE IVDRAGTVLG
HHEGTYRYTV GQRRGLGIAH PHPLYVVGVD AERRQVIVGP KEELLAPGLV ATDVTWVIAL
ATETLEAACK IRYRHHPVPC TVTVLAGNRA QVRFREPEKS VTPGQAVVFY HGDEVLGGGW
IDAAMTEG
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