| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0866 |
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| Symbol | |
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| ID | 3739295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 955556 |
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| End bp | 956404 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637778144 |
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| Product | LytB protein |
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| Protein accession | YP_383833 |
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| Protein GI | 78222086 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.000463051 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.245876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATAA TTCTGGCCAA GCGGGCCGGC TTTTGCTTCG GCGTTAAACG GGCCACCCAG
ATGGCCTTCG AGGCGGCCGA AAAAGAGGGG AAAACCTACT CCCTCGGTCC CATAATCCAC
TCGCCTCAGG TGGTGCACCG GCTTGAGGAG ATGGGTGTTA AGGTTCTCAA GGGGCTCGGC
GAAATAACCG ACGGGACCAT CATAGTCCGT TCCCACGGCG TGACTTCGGA GGAGTTGGAA
GAGGCGGTCC GGAAGGAACT TGAAGTCGTC GATGCCACCT GTCCCTTTGT CAAGAAGGCC
CAAGAGAATG TTCAGAATCT CTCCGAGGCC GGTTACGAAG TGGTTGTTGT GGGGGATGCC
GATCATCCCG AGGTCCAGGG GATCGTTTCC TACGCCAAGG GGAAGGTTTG CGTGGTCGGG
TCCGAGGAGG AAGCGGCACG GTTGCCGAAG ATGAAGAAGA TCGGCATAGT CGCCCAGACC
ACTCAATCTT TCGATAATCT GAAGCATGTG GTCCTCGAAT GTCTTCGCAA GGGGGCAGAA
ATTCGCATCT TCAACACCAT CTGTGATGCG ACGGCCGTGC GCCAGCAGGA GGCGACGGCT
TTGGCCCGCA CGGTTGACTG CATGATCGTT ATCGGTGGCT ACAACAGCGC CAATACCAAA
CGCCTCGCCG AGGTCTGCGC TGAACTCCAA CCCCGGACCC ATCAGATTGA GACGGCCCAG
GAGATCAACC CTGCCTGGTT CGAGGGGGTA GCCAAGGTGG GGGTGACCGC CGGAGCGTCA
ACTCCCAAGT GGCTCATCGA TGAGGTGATC GAGCGGATCA GAGAGATTGA TAGTGCTAAA
ACTAGTTGA
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| Protein sequence | MEIILAKRAG FCFGVKRATQ MAFEAAEKEG KTYSLGPIIH SPQVVHRLEE MGVKVLKGLG
EITDGTIIVR SHGVTSEELE EAVRKELEVV DATCPFVKKA QENVQNLSEA GYEVVVVGDA
DHPEVQGIVS YAKGKVCVVG SEEEAARLPK MKKIGIVAQT TQSFDNLKHV VLECLRKGAE
IRIFNTICDA TAVRQQEATA LARTVDCMIV IGGYNSANTK RLAEVCAELQ PRTHQIETAQ
EINPAWFEGV AKVGVTAGAS TPKWLIDEVI ERIREIDSAK TS
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