| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0863 |
|---|
| Symbol | |
|---|
| ID | 3739292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 952624 |
|---|
| End bp | 953484 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637778141 |
|---|
| Product | prephenate dehydrogenase |
|---|
| Protein accession | YP_383830 |
|---|
| Protein GI | 78222083 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0287] Prephenate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTTCA TCCATAGATT AGCCATCATC GGCGTTGGCC TTATCGGCGG CTCCCTGGCC
CGCATCCTGC GAGAGAAGGG GGCGGTGGGG GAGATTGTCG GAATCGGGCG CGGCGAAGCA
AACCTGCGCA AGGCGGTGGA ACTTGGGGTT ATCGATCGGT ACTCCCTGGA TTCCGTAGCC
GGCGTCGAGG GTGCTGACGT CGTTTTCCTG GCCACGCCGG TCTGCTCCAT TCCTTCCATA
ACGGCCGAGA TTGCCCCCCA TCTGGCTCCC GGTTGCGTGG TGACCGACGG GGGGAGCGTG
AAGGAAGAGA TTGTTTCCGC CTGCGAACCC CTCATGCCGA ACGGGATTCA TTTCGTCGGC
GGGCACCCCA TCGCCGGCAC CGAGCACTCG GGTGTGGAAG CGTCGTTTTC CTCCCTCTAT
GTGGGAAAGC GCTGCATCGT GACCCCTACC TCCCGTACCA GCCAGGATGC CCTTGCCAAG
GTGGTGCGGA TGTGGGAGGT CGCCGGTTCC GAAGTGGTCA TCATGGATAC GGAGAAGCAC
GACCGGGTGC TTGCGGCCAT TTCCCATCTC CCCCACATGG TTGCCTATGC TCTGGTGAAT
GCCGTTGAAG GGTACGACCG CTTCGAGGAG AGTATCCTTC GCTACTCCGC CGGCGGGTTC
CGCGACTTTA CCCGGATAGC CTCGTCGGAC CCGGCCATGT GGCGGGACAT CGCCCTCATG
AATCGGGAAG CGGTCATCGA AATGATGGAC CATTTTGCCG CATACTTTGC GAGACTCCGG
GAGTTGGTGG CAGCGGCCGA CGCCCCTGGA CTCGAACGCT TCTTCCGGGA ATCGAAGGAA
AGCAGAGACG CTATTCTGTA G
|
|---|
| Protein sequence | MPFIHRLAII GVGLIGGSLA RILREKGAVG EIVGIGRGEA NLRKAVELGV IDRYSLDSVA
GVEGADVVFL ATPVCSIPSI TAEIAPHLAP GCVVTDGGSV KEEIVSACEP LMPNGIHFVG
GHPIAGTEHS GVEASFSSLY VGKRCIVTPT SRTSQDALAK VVRMWEVAGS EVVIMDTEKH
DRVLAAISHL PHMVAYALVN AVEGYDRFEE SILRYSAGGF RDFTRIASSD PAMWRDIALM
NREAVIEMMD HFAAYFARLR ELVAAADAPG LERFFRESKE SRDAIL
|
|---|
| |