| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0857 |
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| Symbol | |
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| ID | 3738734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 943526 |
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| End bp | 945262 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637778135 |
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| Product | RecJ exonuclease |
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| Protein accession | YP_383824 |
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| Protein GI | 78222077 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGG TTGCCGAAAA GCGATGGGAG TTACGGACCA ATGACAAGGA GGCTGCGCAG
AGAATTGCCT CGGACTCTTC GGTCGACCCC TTCCTGGCAG CGCTGCTCGC CAACCGGGGC
ATCGCGGATG GCGAATCCGC GCGCCGCTTT CTTTCCTCTT CCCTGGGGGA CGTGAGCGAT
CCCTTCCTTC TGAAGGGAAT GGAAGAGGCA GTTGCCCGCC TCTGTGCGGC ACGGGCACGA
CGTGAAACTG TGTGCGTCTA CGGCGATTAT GATGTGGATG GGATTACTGC CACGGCATTG
CTGGTAAGCT TTTTTCGTGC GGTTGGTATC CGCTGCTTCT ATCATATTCC GAAACGCCTC
GAAGAGGGAT ACGGCCTTTC GGTGGACGGC CTGCGCAAGG TGGCCGAGCA GGCGCAGGTT
GTCGTTACGG TCGACTGTGG GGTGAATGCC GTGGCCGAGG CGGAACTCTG CCTTACGTTA
GGGGTTGACC TCGTCATCAC CGACCACCAC ACCCCTGGTC CGGCCATCCC GAAAGCCTGT
GCCGTTATCA ATCCACTTCA GCCGGGCTGT TCCTATCCCT TTAAATCCCT TGCAGGCGTG
GGCGTCGCTT TTAACGTGAT GGTCGCCCTT CGGGGGCGTC TCAGGGCGGA AGGGGCATTC
GCCGGAGGAA ACGGACCGAA TCTGCGGGAA TACCTCGACC TCGTCGCCCT CGGAACCATT
GCCGATGTGG TTCCTCTCGT GGGAGAGAAC CGGATATTCG TTAAATATGG GCTCCGGGAA
CTTTCCGCTT CGTCGCGGGT TGGAGTGAAG GCCCTTAAGG ATGTGGCGGG AGTCACCGGC
GCCGTGAGTT GTGGTGCTGT CGGCTTCAGG CTTGCACCGC GACTTAACGC AGCCGGCAGA
ATGGAGGATG CCGCTGCCGG GGTTGAACTT CTCCTTGAGA CCGAGCCTGG CCGTGCCGCG
GCCATTGCCG CGGAACTGGA TGCGAATAAC GACGAGCGCC AGGCCCTGGA GCGGCAGATT
CTGACGGACG CCCTGGGACG GGTTCAAGGG AATACCGCCA TGGAGGGGAG AAAAAGTATC
GTTCTCGCCT CCGCTGCGTG GCATCCGGGG GTCATCGGGA TCGTTGCCTC GCGAATGGTC
GATCTCTTCC ATCGTCCGAC CGTGCTCATT GCTCTGCAGG AAGGAAACGG CCGGGGATCG
GGGCGCAGTA TTCCGGGCTT TCACCTCTAC GATGCCCTCG GCGCCTGCGC CGACCAACTC
GTGAAGTTCG GCGGGCACCG TTACGCTGCC GGGCTTTCAA TTGATGAGCC AACGCTGGAA
CTGTTCGTGG ACCGCTTCGA AGAAGTTGCT GCGGGGTTGC TGTCCGCCGA CGACCTGATA
CCGGTGCTCC GCGTGGATGC TGTACTCTCG GCCCAGCAGG TGACAGCTGG TCTGGCGGAC
GCGCTTTCGT CCCTGGAGCC CTTCGGCGCG GGAAATCCCG AACCGCTGTT CGTGCTGAAA
GATATGGAGA TCGTGCGGCG GTGGGCCGTT CGCGGCAACC ATCTCAAAGT ACGGCTTTCT
GGTGGAGGAT TCACTTTTGA CGCCATTGGT TTTAATCTTG CAACGAAGGA GGACAGCTTG
CCAGATCTCG TGGATATCGT TTTTACGCTC GGCTGGAACG AGTGGAACGG CCGCAAAACC
CTGCAACTGA GCCTCAAGGA CATCAGGGAG TCCGGTCAGG TGCTTGAGCC ATGCTGA
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| Protein sequence | MKAVAEKRWE LRTNDKEAAQ RIASDSSVDP FLAALLANRG IADGESARRF LSSSLGDVSD
PFLLKGMEEA VARLCAARAR RETVCVYGDY DVDGITATAL LVSFFRAVGI RCFYHIPKRL
EEGYGLSVDG LRKVAEQAQV VVTVDCGVNA VAEAELCLTL GVDLVITDHH TPGPAIPKAC
AVINPLQPGC SYPFKSLAGV GVAFNVMVAL RGRLRAEGAF AGGNGPNLRE YLDLVALGTI
ADVVPLVGEN RIFVKYGLRE LSASSRVGVK ALKDVAGVTG AVSCGAVGFR LAPRLNAAGR
MEDAAAGVEL LLETEPGRAA AIAAELDANN DERQALERQI LTDALGRVQG NTAMEGRKSI
VLASAAWHPG VIGIVASRMV DLFHRPTVLI ALQEGNGRGS GRSIPGFHLY DALGACADQL
VKFGGHRYAA GLSIDEPTLE LFVDRFEEVA AGLLSADDLI PVLRVDAVLS AQQVTAGLAD
ALSSLEPFGA GNPEPLFVLK DMEIVRRWAV RGNHLKVRLS GGGFTFDAIG FNLATKEDSL
PDLVDIVFTL GWNEWNGRKT LQLSLKDIRE SGQVLEPC
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