| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0843 |
|---|
| Symbol | |
|---|
| ID | 3738297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 928693 |
|---|
| End bp | 929511 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637778121 |
|---|
| Product | Alpha/beta hydrolase fold |
|---|
| Protein accession | YP_383810 |
|---|
| Protein GI | 78222063 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | [TIGR01738] putative pimeloyl-BioC--CoA transferase BioH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTTTG TGGAAACCGC TCAGAAGGTA ACGATCCACT ATGAGGACGA AGGTTCGGGC
TTTCCCCTTG TCTTCGTCCA TGGCTGGGCC ATGTCCGGGA AGGTCTGGGC CTTCCAGAAG
CCCCTGGCTG ACCATTTTCG CCTCATTACG TTGGACCTTC GGGGGCACGG AAAATCGTCC
GCTGCTCCCG GTTACGCCTT TTCCGACTTC GCCGCCGACC TGGCAGCCCT CTTCGACCGG
TTGGGACTCG AGCGCGCTGC ACTTGTCGGC TGGTCCCTGG GGGCCCAGGT GGCCCTGGAG
GCCGTTCCGC TCCTGGAGGA CCGCGTTGCT GCCCTGGTGC TCGTGGCCGG CACCCCCAAG
TTCACCACCG CAGACGGCTG GCCCCACGGC CTCCCGCCAC ATGAGGCACG AGGGCTCGGC
CTGCGGCTGA AGCGGGCCTA TGACGCCACC CTGGGGGACT TTTTCCGGCA GATGTTCGCG
GAGGGGGAGC TGTCCCACGA TCAGTATCAG CGCATCGTCC GGGAGATCGT GATTCCCCGG
CACCTCCCCG ATCCCGGCGC GGTGCAGGCA TGCCTCGTCA CCCTCGCCGG CGGCGACCAC
CGCAATCTCC TGCCCGCTAT CGCCGCGCCG ACCCTCGTCA TCCACGGCGA CCGGGATGCC
ATCTGTTCCC CCAGTGCTGG CCGGTACCTG GCCGAGGGGA TTCCCGGCGC CCGCTTCCTC
TCCCTGGAGG GGACAGGGCA TGCCCCGTTC CTCTCGCAGC CAGAGCGGTT CAACCAGGAG
CTGAGCCGCT TCCTTACGGA GGTGATCGAC CGTGATTGA
|
|---|
| Protein sequence | MPFVETAQKV TIHYEDEGSG FPLVFVHGWA MSGKVWAFQK PLADHFRLIT LDLRGHGKSS
AAPGYAFSDF AADLAALFDR LGLERAALVG WSLGAQVALE AVPLLEDRVA ALVLVAGTPK
FTTADGWPHG LPPHEARGLG LRLKRAYDAT LGDFFRQMFA EGELSHDQYQ RIVREIVIPR
HLPDPGAVQA CLVTLAGGDH RNLLPAIAAP TLVIHGDRDA ICSPSAGRYL AEGIPGARFL
SLEGTGHAPF LSQPERFNQE LSRFLTEVID RD
|
|---|
| |