| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0823 |
|---|
| Symbol | |
|---|
| ID | 3738981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 908533 |
|---|
| End bp | 909432 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637778101 |
|---|
| Product | 3-beta hydroxysteroid dehydrogenase/isomerase |
|---|
| Protein accession | YP_383790 |
|---|
| Protein GI | 78222043 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.00158805 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACACCGG GGATGGGAGA AGCAAACGTG GCGCAGGTGT TCATCGTCGG GTGCGGCGAT
ATCGGAAAAC GGGTGGCACG GCTTGCCATG GATAAGGGAG TTGCGGTGAC AGCCCTTGTC
CGTTCGGAGG AAAGCGCCGC CAAACTGCAT GAACTTGGCA TCGAAACGGT GGAAGGGCAC
CTTGACGACC CCGAATCCCT TGCGGGCCTC CCCCTCCGGG GGGCGACCGT GTTCTACTTT
GCCCCTCCGC CGGGTGGAGG GATAACCGAG CCGAGGGTTC GGGCCTTCTG CGCAGCCGTC
AGGCCGGGCG ACGAGCCGGC ACAGGTGGTT TACCTCAGCA CCAGCGGCGT CTATGGCGAC
TGCGGCGACA TGATCGTGAC CGAAGATACG CCTGCCAATC CCCAGACGGC ACGGGCCAAG
CGCCGCTACG ACGCCGAAAC GGTCTTTCGC GCCTGGGGCA AGGAGCGAGG CGTTCCGATC
GTCGTGCTTC GGGTCACGGG CATCTACGGT CCGGGGCGGC TTCCGCTCCA GCAGCTGACG
AGCGGCCAGC CGGTTCTCTT CGAGAGTGAG GCCTCCTATA CCAATCGGAT CCATTCCGAG
GACCTGGCCC GGGTCTGCAT GGCTGCTGCC GAGAAGGGCG AGGACGGCGA CATATTCAAT
GTGAGTGACG GCAACCCGGG CACCATGACC GAGTACTTCA ACGCCTGCGC CGATGCCCTC
GGTTTTCCGC GCCCCCGGCA GGTGACCATG GAGGAGGCGA AGAAAGTCAT GACACCCCTC
ATGCTTTCCT ATGTTACGGA GTCGCGGCGG ATGGACAACG CGAAAATGGT GGGTAAACTA
GAGGTTAAAC TTCTGTACCC GACCCTCCAG GATGGTCTGA AGGCAAGCGT TGCCAAATAG
|
|---|
| Protein sequence | MTPGMGEANV AQVFIVGCGD IGKRVARLAM DKGVAVTALV RSEESAAKLH ELGIETVEGH
LDDPESLAGL PLRGATVFYF APPPGGGITE PRVRAFCAAV RPGDEPAQVV YLSTSGVYGD
CGDMIVTEDT PANPQTARAK RRYDAETVFR AWGKERGVPI VVLRVTGIYG PGRLPLQQLT
SGQPVLFESE ASYTNRIHSE DLARVCMAAA EKGEDGDIFN VSDGNPGTMT EYFNACADAL
GFPRPRQVTM EEAKKVMTPL MLSYVTESRR MDNAKMVGKL EVKLLYPTLQ DGLKASVAK
|
|---|
| |