Gene Gmet_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0815 
Symbol 
ID3738973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp897972 
End bp898991 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content60% 
IMG OID637778093 
ProductPpiC-type peptidyl-prolyl cis-trans isomerase 
Protein accessionYP_383782 
Protein GI78222035 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000256558 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00000000715296 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACGTAT TCAAAACAGC CCGCAGACAG ATCATCGCCC TCTCGGCGAT CGCCCTTCTT 
GCCGGCACTG CCGGGGCGAA CGCTGCCCCC ACAGCCAAGG CGGACGCGAA GGCGGGTGAG
GCCCCGTCTG CCACGACAGC GGTTGCCCGG GTGAACGGCG TCGACATCAC CAGAGCCGAA
CTGGAGCGGG CGAAGAAGAT CATCCTCTCC CGGAACCAGA TGGCGAGTGC CGCCATGAAC
GACGAGATGT CGAAGAAGGT TGAGGAAGCG GCCCTCAACC AGCTCATCGC CAAGGAACTC
CTCTTCCAGG CCGGCAAGAA GCAGGAGATC AAGGATCTGG ACAAGAAGAT CCAGGAAAAG
GTGGCCGAGC ACAAGGCCCG CTTCAAGTCC CAGGCCGACT ACGAGAAGGC CCTGAAGGAG
ATGGACATGA CCGAGAAGGA GGTCGAGACC TTCACCAGGG AAGACATGGT CATCGGCAAC
CTGATTGAGA CGAAGATCGT CGCCAACACC AAGATCACGG ACGACGAGGC GAAGAAATTC
TACAACGACA ACAAGGACAA GTTCCGCCGG GAGGAAGCGG TCCGCGCCAG CCACATCCTC
GTGAGCGCGG ATCAGAAGGC ATCTCCGGAA GAGAAGAAAA AGGCCAAGGA GAAGGCCGAG
GCCCTGCTCA AGCAACTGAA GGGTGGCGCC GATTTTGCCG AACTGGCCAA GAAGGAATCC
TCCTGCCCCA GTTCCGCCCA GGGTGGTGAT CTGGGCTTCT TCGGCAAGGG GCAGATGGTT
CCCGAGTTTG AGAAGACCGC CTTCAACCTC AAGCCGGGTG AGGTGAGCGA CGTGGTGGAG
ACCCAGTTCG GCTACCACAT CATCAAGCTG GCCGAGAAGA AGGATGCTGA AACCGTCCCC
TTCGAGGAGG CCAAGGAGCG GATCGTCCAG TTCCTCACCC AGCAGAAGGT GCAGGCCGGG
ATTGGCGAGT ACGTGGATGA GCTGAGGAAG AAGGGGAAGG TCGAGATCCT CTCCAAGTAA
 
Protein sequence
MNVFKTARRQ IIALSAIALL AGTAGANAAP TAKADAKAGE APSATTAVAR VNGVDITRAE 
LERAKKIILS RNQMASAAMN DEMSKKVEEA ALNQLIAKEL LFQAGKKQEI KDLDKKIQEK
VAEHKARFKS QADYEKALKE MDMTEKEVET FTREDMVIGN LIETKIVANT KITDDEAKKF
YNDNKDKFRR EEAVRASHIL VSADQKASPE EKKKAKEKAE ALLKQLKGGA DFAELAKKES
SCPSSAQGGD LGFFGKGQMV PEFEKTAFNL KPGEVSDVVE TQFGYHIIKL AEKKDAETVP
FEEAKERIVQ FLTQQKVQAG IGEYVDELRK KGKVEILSK