| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0811 |
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| Symbol | |
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| ID | 3738969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 892515 |
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| End bp | 894068 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637778089 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_383778 |
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| Protein GI | 78222031 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.000173561 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTATGG AAAAATTCGA AATAACACAG AGCAACAGAG CAACAGAGGG GAAATCGGAT
TTCGCGGCAC AATTTTACCT CAATACCCAA CAGCGGTCGC CGAGTCCTAG CGGTTCCACG
TCGAAGCCTT TCTCTGTTGC TCAGTTGCTC TGTGTTTCAA TTATGACTTT GACCCTGGCC
GGCTGCACCA CCATGGCCCC CAAATACGAG CGTCCCGCCG CACCCGTTTC GGCTGCATGG
CCGGAAGGCC CGGCGTATAA GGAGACTGGC GTCAGGTCCG GAAAGCCGGT GGCCGACATC
CCGTGGCAGG AGTTCTTCGA GGACGAAAAG CTGCGGAAGC TGATTGCCCT GGCCCTGGAG
AACAACCGGG ACCTGCGGGT GGCCGCCCTC AACATAGAGC GCTCCCGGGC CCAGTATCGG
ATTCAACGCT CCGATCTCTT TCCGAAGGTG GACGCCACCG CCGATGGCAG CGTCCAGAGA
ATCCCCCAGG ATCTCTCTGC TACCGGCCAG GCCCGCACCG TCGACCAGTA CAGCGTCGGT
CTTGGGGTCA GTTCCTATGA GCTGGATCTC TTCGGTCGGG TGCGGAGCCT CAAGGACCAA
GCGCTGGAGC AGTACCTGGC CACGGAACAG GCCCGCCGCA GTGTGCAGAT CAGCCTGGTG
GCCGAGGTGG CCTCCAACTA CCTGACCCTG GCCGCCGACC GGGAACGGCT GAAGCTGGCT
CAGGATACGC TGGCGAGCCA GCAGTCCTCC TACAACCTCA CCAAGAGTCG CTTCGAGGCC
GGTGTCTCCT CGTTCCTCGA TCTCAACCAG GCGCGGACCA GCGTGGAGTC GGCCCGGGTG
GACATAGCCC GCTACACGAC GCTGATAGCC CAAGACGTAA ATGCCCTCAA TCTCGTGGTG
GGATCGCCGG TGTCGACGGC GCTCCTCCCC GCTGCCCTCA CCGAGAACCT TTCCGCCATG
AAGGATGTGG CGCCGGGGCT GCCGTCCGAC GTGCTACTGC GCCGTCCCGA CATCCTCCAG
GCAGAGAACC TCCTGAAGGG GGCCAACGCC AACATCGGCG CGGCCCGGGC CAACTTCTTC
CCCCGCATTA CCCTGCTTTC AAGCGTCGGT TTCGGGAGCG ACGAGTTGAC GGGGCTCTTC
TCCGGGAATT CCTTCACCTG GAACTTTGCG CCGCGGATAA CACTGCCGAT CTTCACCGCC
GGAGCGAACC AGGCCACCCT CAAGGTGGCG GAGGTGGACC GTGATATCGC CGTGGCCCAG
TACGAGAAGG CGATCCAGAC CGCCTTCCGG GAAGTGGCCG ACGCCCTGGC CCAGCGGGGA
ACCATCGACG ATCAACTCTC GGCCCAGCAG TCCCTCACCG ACGCCACCTC CGAAAGCTAC
CGCCTCTCCC AGGCACGGTA CGAAAAAGGA GTCGACAGCT ACCTCCAGGT GCTCGATTCC
CAGCGGGCCC TCTACGGAGC CCAGCAGAAC CTGATCGGCG TCCGCCTGGT CCGCCTCCTT
AACGTGGCGA CCCTCTACAA AGTGTTGGGG GGCGGCGCTC CCGGGCAAGA GTAA
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| Protein sequence | MTMEKFEITQ SNRATEGKSD FAAQFYLNTQ QRSPSPSGST SKPFSVAQLL CVSIMTLTLA
GCTTMAPKYE RPAAPVSAAW PEGPAYKETG VRSGKPVADI PWQEFFEDEK LRKLIALALE
NNRDLRVAAL NIERSRAQYR IQRSDLFPKV DATADGSVQR IPQDLSATGQ ARTVDQYSVG
LGVSSYELDL FGRVRSLKDQ ALEQYLATEQ ARRSVQISLV AEVASNYLTL AADRERLKLA
QDTLASQQSS YNLTKSRFEA GVSSFLDLNQ ARTSVESARV DIARYTTLIA QDVNALNLVV
GSPVSTALLP AALTENLSAM KDVAPGLPSD VLLRRPDILQ AENLLKGANA NIGAARANFF
PRITLLSSVG FGSDELTGLF SGNSFTWNFA PRITLPIFTA GANQATLKVA EVDRDIAVAQ
YEKAIQTAFR EVADALAQRG TIDDQLSAQQ SLTDATSESY RLSQARYEKG VDSYLQVLDS
QRALYGAQQN LIGVRLVRLL NVATLYKVLG GGAPGQE
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