| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0810 |
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| Symbol | |
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| ID | 3738968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 889352 |
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| End bp | 892513 |
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| Gene Length | 3162 bp |
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| Protein Length | 1053 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637778088 |
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| Product | hydrophobe/amphiphile efflux-1 HAE1 |
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| Protein accession | YP_383777 |
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| Protein GI | 78222030 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.0578255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCT TTTTCATAAA CAGACCCATC TTTGCCTGGG TAATCGCCAT CATGGTCATG
CTGGCCGGCC TCCTGGCGAT CAAGACCCTG CCGGTCTCCC AATACCCTCC CATCGCACCA
CCCCAGATCA CCATCAACGC CATGTATCCC GGCGCCTCGG CCCAGACGGT GCAGGATACG
GTAACCCAGG TGATCGAGCA GAAGCTGAAC GGGATCGACA ACCTGATCTA CATGTCCTCC
ACCAGCGATT CGGCCGGCGC CGTGGCCATC AACCTCACCT TCAAGGCCGG CACCGACCCG
AACATCGCCC AGGTGCAGGT GCAGAACAAG CTGCAGCTCG CCACGCCGCT CCTCCCCCAG
ATCGTCCAGA AACAGGGGAT TCAGGTGGTC AAGTCCACCA AGAACTTCCT CCTGATCGTC
GGGGTCGTGT CGGAGGACGG CTCCATGGAC CGCCCGGCCC TGACCGACTA TCTGGTTGCC
AACGTCCAGG ACGTCATCAG CAGGACGGAA GGGGTCGGCG AGGTAACGGT CTTCGGCTCC
CAGAACGCCA TGCGGATCTG GCTCAACCCG GCCAAGCTCA ACAACTACCA CCTCACCACC
AACGACGTCA TCGCGGCGGT GCAGGCCCAG AACGCCCAGG TGTCAGCCGG CCAGTTCGGC
GGGAATCCGG CGCCCCCGGG ACAGCAGTTG AACGCCACCA TCACGGCCCG CACCCTCCTC
CAGACACCGG AGCAGTTCAA CGCCATCATC CTGAGGACCA ACCCCGACGG TTCCACGGTC
AGGCTGAAGG ATGTGGCCGA ATGTAAGATC GGCACCGAGA ATTACGATAT CGAAGCACGG
TACAAGGGAA AACCGATGGG GGGGATGGCG CTGCGCCTGG CCGCGGGCGC CAACGCCCTG
GACACCGCCG ACCGGGTCAA GGCGAAGATG GCGGAACTGT CGAAATACTT CCCCGCCGGC
ATGGAGGTGG TCTACCCCTA CGACACCACC CCCTTCGTCA AGGTCTCCAT TGAAGAGGTG
GTCCAGACCC TGATCGAGGC GGTCTTCCTC GTCTTCATCA TCATGTTCCT CTTCCTGCAG
AATATCCGGG CCACCCTGAT CCCCACCATC GCCGTTCCGG TCGTCCTGCT CGGCACCATG
GGGGCGTTGT CGGCCGCCGG CTTCTCCATC AACACCCTGA CCATGTTCGC CCTGGTCATC
GTCATCGGCC TCCTGGTGGA CGACGCCATC GTCGTGGTGG AGAACGTGGA ACGGATCATG
TCCGAGGAGG GGCTCTCGCC CCACGACGCC ACCGTCAAAT CCATGGGGCA GATCACCAGT
GCCCTCTGGG GGATCGCCAC CGTCCTCTCG GCGGTCTTCC TCCCCATGGC CTTCTTCGGC
GGCTCCACCG GCGTCATCTA CCGCCAGTTC TCCATCACCA TCATCTCCGC CATGATTCTC
TCGGTGATGA CGGCCCAGAT TCTGACGCCG GCCCTCTGCT CCACCCTGCT CAAGCCGGTG
GAGAAGGGGC ATGAGGCGTG CGAGACTGGC TGGTTCTGCG GTTTCTTCCG CTGGTTCAAC
AAATGCTTCA ACTGGTGCCG GGGCAGATAC GAAGGGATCG TCGGCCGTTC ATTCGGCAAG
CCGGTGCGCT ACCTGGTGAT TTACGGGGTC ATCGTGGCGG CCATGGCGTT CTTCTTCCTG
CGCCTTCCCA CCGCATTCCT CCCCGACGAG GACCAGGGGT TCATCGTCTG CCAGGTCCAG
CTCCCTGCAG GGGCTGCCCA GGAGCGGACT ATCACAGTGC TCGAGCAGCT TGAACACCAC
TTCCTGGAGA AGGAGAAGAA GTCGGTGGAG ACGATCATTA CCATTGCCGG CTTCAGCTTT
GCCGGCCGGG GCCAGAACAT GGGGCTTGCC TTTGTCAGGC TCAAGGACTG GAAGCTGCGC
CCGACCCCCG ACATGAAGGC GCCGGCCGTT GCCGGACGGG CCATGAAGGC TTTCTCGCAG
ATCCGCGACG GCCTCGCCTT TGCCTTTTCA CCGCCGGCGG TGGTGGAGCT GGGGCAGGCC
AACGGCTTCG ACTTCCAGCT GCAGGACCGT GCCGGCCTTG GCCATGAGAA GCTGATGGAG
GCCCGCAACC AGCTCCTCGG CATGGCCATG AAGAACCCCA AGCTGATCGC GGTGCGCCCC
AACGGGCAGG ATGATTCGCC CCAGTTCAAG CTCGACATTG ACGACGTGCG GGCCGGGGCC
CTGGGGGTCA ACCTGGCCGA TGTCAACAGC GTACTGGCCA CGGCCTGGGG AAGCTCCTAC
GTCAACGACT TCATCGAGAA CGGTCGGGTG AAGAAGGTCT ATCTCCAGGC TGAACCCAGG
TCCCGCATGC TGCCGGAGGA CATCAACAGC TGGTACGTGA ACAACAGAAA CGGCGAGATG
GTCCCCTTCT CGGCCTTCGC CACCGCCCAC TGGAAGTACG GCTCGCCCCG GCTTGAGCGT
TACAACGGCA TTCCGTCCGT GGAGATCATG GGACAGGCGG CGCCCGGGGT GAGCACCGGC
GAGGCCATGG TCGAGATGGA GAAGATGGCG GCCCAGCTTC CGCCGGGCAT CGGTTACGAG
TGGACCGGAC TCTCCTACGA GGAAAAACAG GCCGGCAAGC AGGCGCCCGC CCTCTACGCC
ATCTCGCTCC TGGTGGTGTT CCTCTCCGTG GCGGCCCTCT ACGAAAGCTG GACCATCCCC
TTCGTCAACC TGCTGATGCT TCCCCTCGGC CTGGTGGGGG CGGTCACGGC GGTGAAGCTG
CGGATGCTTC CCAACGACGT CTATCTCCAG ATAGGGCTTC TCACCACCGT GGGCCTGTCG
ACGAAGAACG CCATCCTGAT CATCCAGTTC ATCAAGGACC AGATGCACCA GGGGCATGAA
CTGGTGGAGG CGACCCTGAC GGCGGTGAAG ATCCGATTGC GGCCGGTCAT CATGACCTCA
CTGGCCTTCT TCTTCGGCAC CCTGCCGCTG GCACTCACCA AGGGGGCCGG GGCCGCGGCC
CAGAACGCCA TCGGCACCGC CGTGACCGGG GGGCTGCTTT CGGCTACCTT CATCGACTTG
ATCTTCATCC CGTTCTTCTT CGTGATGGTG TCGAAGGTGT TTGCCAAGAA AAAGCAGCCT
TCCGTTCAGC CGGCCGCTGA AGCAGCGTCG GAGGTGAATT GA
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| Protein sequence | MSRFFINRPI FAWVIAIMVM LAGLLAIKTL PVSQYPPIAP PQITINAMYP GASAQTVQDT
VTQVIEQKLN GIDNLIYMSS TSDSAGAVAI NLTFKAGTDP NIAQVQVQNK LQLATPLLPQ
IVQKQGIQVV KSTKNFLLIV GVVSEDGSMD RPALTDYLVA NVQDVISRTE GVGEVTVFGS
QNAMRIWLNP AKLNNYHLTT NDVIAAVQAQ NAQVSAGQFG GNPAPPGQQL NATITARTLL
QTPEQFNAII LRTNPDGSTV RLKDVAECKI GTENYDIEAR YKGKPMGGMA LRLAAGANAL
DTADRVKAKM AELSKYFPAG MEVVYPYDTT PFVKVSIEEV VQTLIEAVFL VFIIMFLFLQ
NIRATLIPTI AVPVVLLGTM GALSAAGFSI NTLTMFALVI VIGLLVDDAI VVVENVERIM
SEEGLSPHDA TVKSMGQITS ALWGIATVLS AVFLPMAFFG GSTGVIYRQF SITIISAMIL
SVMTAQILTP ALCSTLLKPV EKGHEACETG WFCGFFRWFN KCFNWCRGRY EGIVGRSFGK
PVRYLVIYGV IVAAMAFFFL RLPTAFLPDE DQGFIVCQVQ LPAGAAQERT ITVLEQLEHH
FLEKEKKSVE TIITIAGFSF AGRGQNMGLA FVRLKDWKLR PTPDMKAPAV AGRAMKAFSQ
IRDGLAFAFS PPAVVELGQA NGFDFQLQDR AGLGHEKLME ARNQLLGMAM KNPKLIAVRP
NGQDDSPQFK LDIDDVRAGA LGVNLADVNS VLATAWGSSY VNDFIENGRV KKVYLQAEPR
SRMLPEDINS WYVNNRNGEM VPFSAFATAH WKYGSPRLER YNGIPSVEIM GQAAPGVSTG
EAMVEMEKMA AQLPPGIGYE WTGLSYEEKQ AGKQAPALYA ISLLVVFLSV AALYESWTIP
FVNLLMLPLG LVGAVTAVKL RMLPNDVYLQ IGLLTTVGLS TKNAILIIQF IKDQMHQGHE
LVEATLTAVK IRLRPVIMTS LAFFFGTLPL ALTKGAGAAA QNAIGTAVTG GLLSATFIDL
IFIPFFFVMV SKVFAKKKQP SVQPAAEAAS EVN
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