Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0802 |
Symbol | |
ID | 3738158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 882241 |
End bp | 882900 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637778080 |
Product | tia invasion determinant-related protein |
Protein accession | YP_383769 |
Protein GI | 78222022 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAA TTCTCATTGC CGCTGCAGCC ATCGCCATCT GGGGGATGCC CGCCATGAGC CAGGCAACGC CTGCCCGGCC CGGGGGGTAT TTTTCCGGTT TCCTCGGGGT GAGCATCCCC CGGGACGCCG ACGTTGCCGG CACCGATTCC GGTACATCCT TCAACGACCG GGTGGAGTTC GATCCCGGTA TTGTCGTGGG TGGCACCGCT GGGTATGATT ACGGCTTTCT CCGCCTGGAG GGGGAGCTTT CCTACCGGCA TTCTGAGATC AAGTCCGTCA CTGCTTCGGA CGGGTACCGC TTCCACGGCG TGGATGGTGA TCTCGGTGCC CTGGCGGTCA TGGCCAACGC CTTTGTCGAT ATGCACAACC AGAGCCCCAT TACCCCCTAC GTGGGAGGAG GCGTCGGCTT CGCCGTGCTC AATCTGGGTA ATACCACCAG TACTGAATTG GACCCCCTCT ATGAGAAGGG GGATGACACC GTTTTCGCCT ACCAGGCGGG AGCCGGGGTG GAGATAGCCC TCAACCCGAT CATGTCCCTT GACCTGGGAT ATCGCTATTT CGGCACTTCA AAGGCCACCT TCGACGAAGG TGTGGTGACG GCGACCAAGT TCAGGTTCGA GAGCCACAAT GCGCTGATGG GGCTCAGGGT CAAGTTCTAG
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Protein sequence | MKRILIAAAA IAIWGMPAMS QATPARPGGY FSGFLGVSIP RDADVAGTDS GTSFNDRVEF DPGIVVGGTA GYDYGFLRLE GELSYRHSEI KSVTASDGYR FHGVDGDLGA LAVMANAFVD MHNQSPITPY VGGGVGFAVL NLGNTTSTEL DPLYEKGDDT VFAYQAGAGV EIALNPIMSL DLGYRYFGTS KATFDEGVVT ATKFRFESHN ALMGLRVKF
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