Gene Gmet_0787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0787 
Symbol 
ID3738143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp868232 
End bp868978 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content62% 
IMG OID637778065 
ProductABC transporter-related protein 
Protein accessionYP_383754 
Protein GI78222007 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAC TCGTTGACAT CCACAAGTCA TTCGACTCCC AGACAGTGCT GGACGGCCTT 
TCCCTGGAAA TACCCGAGGG GAAGATCACG GCGGTGATCG GCCCCAGCGG CGAAGGGAAG
AGCGTGCTCC TGAAGCACAT GATTGGCCTC ATGAAGCCCG ACCGGGGCCA AGTCCACGTG
GACGGGGAAA ACATCACCGC CATGCGCCGG TTCGAGATGA ACCGGGTCTG GGAGAAGTTC
GGGATGCTCT TCCAGAACGC GGCCCTCTTC GACTCCATGA CAGTCTTCGA GAACGTGGCG
TTCCCCCTGG AGGAGAAGAC CCGGTTCTCC CGGGCCGAGA TTCGCGACCG GGTCCACAAC
GCCTTGGAGA ACGTGGGGCT CAGGGGGATC GACAAAAAGT ACCCCGACGA GCTGTCAGGG
GGGATGAAGA AACGGGTGGG GCTTGCCCGG GCGCTGTTGC TGAACCCGCG GATCATCCTC
TTCGACGAGC CGACCACGGG GCTTGACCCG ATCATCTGCC GGGCCATCCA CCAGCTCATC
AGGGATACCC ACGAACGGTA CGGCTACACG GCGGTGATCG TCTCCCACGA GATTCCCGAG
ATCTTCGACA TCTCGGACCA GGTGGCCATG CTCTACCGGG GACGGATCAC CGAGATGGGG
ACGCCGGAGG AGATCCGGCG CTCGGAGCAC CCGGTGGTGC GGCAGTTCAT CAGCGGCAGT
CTCGAAGGAC CCATCAAGTT CATCTGA
 
Protein sequence
MIKLVDIHKS FDSQTVLDGL SLEIPEGKIT AVIGPSGEGK SVLLKHMIGL MKPDRGQVHV 
DGENITAMRR FEMNRVWEKF GMLFQNAALF DSMTVFENVA FPLEEKTRFS RAEIRDRVHN
ALENVGLRGI DKKYPDELSG GMKKRVGLAR ALLLNPRIIL FDEPTTGLDP IICRAIHQLI
RDTHERYGYT AVIVSHEIPE IFDISDQVAM LYRGRITEMG TPEEIRRSEH PVVRQFISGS
LEGPIKFI