Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0787 |
Symbol | |
ID | 3738143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 868232 |
End bp | 868978 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637778065 |
Product | ABC transporter-related protein |
Protein accession | YP_383754 |
Protein GI | 78222007 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAC TCGTTGACAT CCACAAGTCA TTCGACTCCC AGACAGTGCT GGACGGCCTT TCCCTGGAAA TACCCGAGGG GAAGATCACG GCGGTGATCG GCCCCAGCGG CGAAGGGAAG AGCGTGCTCC TGAAGCACAT GATTGGCCTC ATGAAGCCCG ACCGGGGCCA AGTCCACGTG GACGGGGAAA ACATCACCGC CATGCGCCGG TTCGAGATGA ACCGGGTCTG GGAGAAGTTC GGGATGCTCT TCCAGAACGC GGCCCTCTTC GACTCCATGA CAGTCTTCGA GAACGTGGCG TTCCCCCTGG AGGAGAAGAC CCGGTTCTCC CGGGCCGAGA TTCGCGACCG GGTCCACAAC GCCTTGGAGA ACGTGGGGCT CAGGGGGATC GACAAAAAGT ACCCCGACGA GCTGTCAGGG GGGATGAAGA AACGGGTGGG GCTTGCCCGG GCGCTGTTGC TGAACCCGCG GATCATCCTC TTCGACGAGC CGACCACGGG GCTTGACCCG ATCATCTGCC GGGCCATCCA CCAGCTCATC AGGGATACCC ACGAACGGTA CGGCTACACG GCGGTGATCG TCTCCCACGA GATTCCCGAG ATCTTCGACA TCTCGGACCA GGTGGCCATG CTCTACCGGG GACGGATCAC CGAGATGGGG ACGCCGGAGG AGATCCGGCG CTCGGAGCAC CCGGTGGTGC GGCAGTTCAT CAGCGGCAGT CTCGAAGGAC CCATCAAGTT CATCTGA
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Protein sequence | MIKLVDIHKS FDSQTVLDGL SLEIPEGKIT AVIGPSGEGK SVLLKHMIGL MKPDRGQVHV DGENITAMRR FEMNRVWEKF GMLFQNAALF DSMTVFENVA FPLEEKTRFS RAEIRDRVHN ALENVGLRGI DKKYPDELSG GMKKRVGLAR ALLLNPRIIL FDEPTTGLDP IICRAIHQLI RDTHERYGYT AVIVSHEIPE IFDISDQVAM LYRGRITEMG TPEEIRRSEH PVVRQFISGS LEGPIKFI
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