Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0701 |
Symbol | |
ID | 3738427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 770651 |
End bp | 772618 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637777979 |
Product | Cache sensor signal transduction histidine kinase |
Protein accession | YP_383668 |
Protein GI | 78221921 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.831837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCCGCT ATTTTTTTGC CTTCATGAAC AACCTGAAGC TGCGCTGGAA GATGCTGGTG CTGGTGCTCC CCCTCGTGAC GGTTCCGATC GTTCTGGTCG GTGGGGTCAT CAGCTACATT TCAACCCAAC AGGCGTACCG GGGGATCACC CAGACCAGCA AGGACGACCT GGCCCACATG GCCAGTTTCA CCATCGACCT CCTCAATTCC CACTACCAGC AGTTCCAGGT ATACAAGCAG GACAAGCAGC GGAGCACCAA CCTGGAGCTG GCCACCCTCA CCACCCTTGC CTACAACATG GTGGAGGCCC AGCATCGCCA GTACAAGAGC GGCAAGGTCG ACCTCCGGAC CGCCAAGGAA GAGGCCCGCA AGGCCCTGAA ACGGGTCAAC GTGGGGACGA CCGGCTACAT CTACGCCATG TCCACCAAGG GGGATCTGGA GGTGCACATC GCCCGGGAGG GGGAGAACGT CTACGAGGAG AAGGACGAGA ACGGCCGCCC CTTCATCCGG ATCATGTGCG AGAACGCCCT GAAGTCCAAG CCGGGGGAGG TCCTCTACAT CGTCTACCCC TGGCGCAACC CGGTGCTCGG CGACAAGTAT CCCCGCAACA AGGTGGTTGC CTACCGTTAT TTCCGGGAGT GGGACTGGAT CATCGCCTCG GGGGGCTACC TGGAGGAGAC CTACGAAGAC CTCGCCTTTG AGCGCCGCTC TTTCCAGGAG CTGAAGGATA AGATCAAGAG CAAGAAGGTG GGGGATACCG GCTACATTTT CTGCATGGAC GACAAGGGGA ACTTCACCGT TCACCCCGGC GGGGAGGGGA AGAATTTCCT CAACGCCGTG GATTCCAGCG GCCACAAGTT CATCAAGGAA ATGGTGGAGA AGAAGCGGGG CTGGATCCGC TATCCCTGGC TCAACCCCGG GGAAAAGAAC CCGCGGATGA AGATCGTCCG CTACGACTAC TTCAAACCGT GGGGATGGAT TGTGGCGGTC GGCTCCTACG AGGACGAGTT CTACGGGGAG GCCAACAAGA TCCGGGGCCG GATCGCAGCC TCCATGACGC TGCTGACCAT TGTGACGAGT GTTGTGGCCA CCGGGCTGGT CTTCCTGGCG GCCAAGATTT TCACTCAGCC CATCATGCAC ATGATCGACG TGATCCGTAG GGTGAAGAAA GGGCGGCTCG ACGAGCAGAT GGAGGTGGAT GCGGGGGATG AGCTGGGCGA GATGGCGTCG GCCTTTAACC TGATGACCGC CATGATCCGC CAGAACAAGG AGATGGAGGC AAGCCTCGCC CAGCAGGGGA AGATGGCGTC CCTCGGTGTC CTCTCCTCGG GGGTGGCCCA CGAGATCAAC AACCCACTCG GGGTTATCCT TGGCTACGCC TCCTACATCG AGGGGAAAAC CAGCGAGGAT GATCCCAACT ACAGGTTCAT CCACGAGATC AAGCGGGAGA GCAAGCGGTG CAAGAAGATC GTCCAGGATC TCCTCTCCTA TGCCCGCACC CCCAAGCCGG CCCTGGAGTG GACCGACGTG AACGACCTGC TGGGGCAGAT CGTCGATTTC GCCGCCAATC ACACCGACAT GCACCACGTG ACCGTCGTGA AGGATTTCTC TCCCGAATTG CCCCGGGTCA TGGTCGACGG CGACCAGATC AGGCAGGTGG CCATCAACCT GATCCTGAAC GCCGGAGCCG CCATGTCCGG GGAAGGGACC CTGACGGTGA AATCGTTCCT GGACGGCGAG GGGTACGTAA ACATCGTCTT CTGTGACAAC GGGGCGGGAA TACCCGCCGA GGACATCGAA AAAATTTTCG AGCCCTTCTT CACCACCAAG GCCAAGGGGA CGGGGCTCGG CCTTGCCATC ACGAAGCAGA TCATCGAGAT GCACCATGGC AAGATCAGCA TCCTGAGCGA AGTGGGGAAG GGGTCCGACG TGATTGTGAA GCTGCCGGTG GACCGGGACG AGCTGTGA
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Protein sequence | MRRYFFAFMN NLKLRWKMLV LVLPLVTVPI VLVGGVISYI STQQAYRGIT QTSKDDLAHM ASFTIDLLNS HYQQFQVYKQ DKQRSTNLEL ATLTTLAYNM VEAQHRQYKS GKVDLRTAKE EARKALKRVN VGTTGYIYAM STKGDLEVHI AREGENVYEE KDENGRPFIR IMCENALKSK PGEVLYIVYP WRNPVLGDKY PRNKVVAYRY FREWDWIIAS GGYLEETYED LAFERRSFQE LKDKIKSKKV GDTGYIFCMD DKGNFTVHPG GEGKNFLNAV DSSGHKFIKE MVEKKRGWIR YPWLNPGEKN PRMKIVRYDY FKPWGWIVAV GSYEDEFYGE ANKIRGRIAA SMTLLTIVTS VVATGLVFLA AKIFTQPIMH MIDVIRRVKK GRLDEQMEVD AGDELGEMAS AFNLMTAMIR QNKEMEASLA QQGKMASLGV LSSGVAHEIN NPLGVILGYA SYIEGKTSED DPNYRFIHEI KRESKRCKKI VQDLLSYART PKPALEWTDV NDLLGQIVDF AANHTDMHHV TVVKDFSPEL PRVMVDGDQI RQVAINLILN AGAAMSGEGT LTVKSFLDGE GYVNIVFCDN GAGIPAEDIE KIFEPFFTTK AKGTGLGLAI TKQIIEMHHG KISILSEVGK GSDVIVKLPV DRDEL
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