Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0656 |
Symbol | |
ID | 3738305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 716269 |
End bp | 717402 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637777934 |
Product | hypothetical protein |
Protein accession | YP_383623 |
Protein GI | 78221876 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00117213 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAGCTCC AGCGCGTGGC GGCCGTGGCC CGCAAGGAAT TCATTCACGT CTTTCGGGAT CCCCGGAGCC TCGGCATGGG GATCGCGATT CCGATGCTGC TGCTCTTTCT CTTCGGCTAC GCCCTCACCC TGGACGTGGA CCGGGTGCCG CTCATGGTCT GGGACCAGAG CGCCACCCCC GAGAGCCGGG ACTTCATCAG CCACTTCGCC GGCTCCCGTT ACTTCACCCT GGCTGGGCGC GTCGGCACCT ACCGGGAAAT CGAGATTGCC ATCGACCGGC GCGACGTCCT CATGGCCCTG GTGATCCCCA CCGATTTCGC CCGCAAGGTT CGGACGGGGA TGCCGGCGCC GGTGCAACTG ATCCTGGACG GGAGCGACTC CAACACTGCC ACCATCGCCT TGGGGTATGC CGAGGCCGTG ACCTCTGTCT GGGCCCGGGA GGTGGTCCTT GAGCAGACCC GACGCTTCGG GCCTGTTCCC GCCGCCGGCA GCGTGGATGT GCGCCCCCGG GTCTGGTTCA ACACCGACAT GGTCTCCCGC AACTACATCT TCCCGGGGCT CATCGCGGTC ATCATGATGG TCATCGCCGC GCTCCTCACC TCCCTCACCG TGGCTAGGGA GTGGGAAACC GGCACCATGG AGCAACTCAT CACCACCCCG CTCCGGGGGG CGGAGCTCAT CGTCGGCAAA CTCATCCCCT ATTTCGCCAT CGGCATCCTC GACCTGGTCC TCTCGGTCCT GGTGGGGGAG TTCGTCTTTG ACATCCCGCT GCGGGGGAGC CTCTGGCTCC TGTTCGCCAT GTCGCTCATC TTTCTCACCT GCGCCCTCGC CTTCGGGCTC CTCATCAGCA TCGTCACCAA GAACCAGCGA CTCGCCTCCC AGACCGCCAT GGTGACCACC ATGCTCCCGG CATTCCTCCT CTCCGGCTTC ATCTTCCCCA TCGAGAACAT GCCTCCCCCC ATCCAGGCAG TAACCCACAT CATTACGGCC CGCTACTTTG TCACCATCCT GCGGGATATC TATCTGAAGG GAGTGGGGCT CGGCGTGCTG GCACCGGAGG CGGCGTTTCT GGCGGTCTTC GGAGTGGTGG TCCTGGCCCT GGCGGTAAAA AAATTCCGGA AGAAGGTGGA GTGA
|
Protein sequence | MKLQRVAAVA RKEFIHVFRD PRSLGMGIAI PMLLLFLFGY ALTLDVDRVP LMVWDQSATP ESRDFISHFA GSRYFTLAGR VGTYREIEIA IDRRDVLMAL VIPTDFARKV RTGMPAPVQL ILDGSDSNTA TIALGYAEAV TSVWAREVVL EQTRRFGPVP AAGSVDVRPR VWFNTDMVSR NYIFPGLIAV IMMVIAALLT SLTVAREWET GTMEQLITTP LRGAELIVGK LIPYFAIGIL DLVLSVLVGE FVFDIPLRGS LWLLFAMSLI FLTCALAFGL LISIVTKNQR LASQTAMVTT MLPAFLLSGF IFPIENMPPP IQAVTHIITA RYFVTILRDI YLKGVGLGVL APEAAFLAVF GVVVLALAVK KFRKKVE
|
| |