| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0652 |
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| Symbol | rpsD |
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| ID | 3738301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 712707 |
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| End bp | 713333 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637777930 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_383619 |
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| Protein GI | 78221872 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0000063481 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGCTAGAT ATACAGGTCC TTCCTGCAGG CTTTGCAGGC GGGAAAACAT GGAGTTGTTT
CTCAAGGGTG AGCGTTGTTA CACTGACAAG TGTGCCATAA AGCGTAGGAA TTATCCTCCC
GGCCAGCATG GTCAGGGAAG GCCGAAGGTT TCCAACTACG GGATTCAGCT TCGGGAGAAG
CAGAAGGTTC GTCGGATTTA CGGCGTACTT GAGAAACAGT TCCGCAGTTA CTTTGAAGAG
GCTGACCGGA TGCGGGGCGT TACGGGTGAG AATCTGCTTT CACTCCTTGA ACGGCGCCTT
GATAACGTAG TATATCGCCT CGGCTTTGCT TCCTCTCGTA CAGAGGCAAG GATTCTGGTC
CGCCACAATC ACTTCACCCT TAATGGAAGA AAAGCGAATA TTCCCTCTAT CCAACTCAAG
GCTGGTGATG TGGTTGTGCT GAAAGAAAAG AGCCGCAAGA TTGCCTGCAT CAATGAATCC
CTTGATGCGG TCGTTCGCCG TGGGACCCCT CAGTGGCTTG AGCTTGACAA AGAAGGCTAC
AAAGGCGTTG TAAAACTGCT CCCCGCTCGC GAGGACATTG CAATGCCGAT TCAGGAGCAA
CTGATCGTCG AGCTTTACTC CAAGTAA
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| Protein sequence | MARYTGPSCR LCRRENMELF LKGERCYTDK CAIKRRNYPP GQHGQGRPKV SNYGIQLREK
QKVRRIYGVL EKQFRSYFEE ADRMRGVTGE NLLSLLERRL DNVVYRLGFA SSRTEARILV
RHNHFTLNGR KANIPSIQLK AGDVVVLKEK SRKIACINES LDAVVRRGTP QWLELDKEGY
KGVVKLLPAR EDIAMPIQEQ LIVELYSK
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