| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0646 |
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| Symbol | secY |
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| ID | 3738353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 708986 |
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| End bp | 710293 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637777924 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_383613 |
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| Protein GI | 78221866 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00379524 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000000811889 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGATAGAGG CGTTTCAAAA CATCTTCAGA ATACCGGAAC TTAAAAAGCG AGTTCTTTTT
TCATTAGGGA TGCTCGCCGT TTACCGGGTA GGGTGCCATA TTCCGACTCC AGGGATCGAC
AGCACCGCAC TTGCACACTT CTTTGCACAA GCCCGTGGTA CACTCCTCGG GCTTTTCGAC
ATGTTTTCGG GGGGTGCTCT GGAGAAGCTT ACGGTATTTG CTCTGGGCAT CATGCCGTAC
ATTTCGTCCT CTATTATCTT TCAGTTGTTG ACGGTAGTTG TCCCTGCCAT CGAAAAACTT
TCAAAAGAAG GCGAATCTGG CCGCAAGAAG ATTATTCAGT ACACGCGGTA TGGAACTATC
GTTTTGAGCG TTGTTCAGGC TCTGGGCATT AGTATCGGAC TCGAAAGCAT GCGTGGACCA
GCCGGTGAGC TTGTGGTGCC GAGTCCTGGC TGGGGATTTA GATTTATGAC CGTTATTACT
CTGACCGCTG GCACAGCCTT CATTATGTGG CTTGGCGAGC AGATGTCGGA GAAGGGCATT
GGTAACGGTA TCTCCTTGAT CATTTTTGCC GGTATTGTTG CAAGGATTCC GGTGGCGCTG
GGCAACTCGG TGCGGCTGCT CAAGACAGGT CAAATTTCTC TCTTTGTAAT CTTGTTTATA
CTTGTTCTCA TGTTCTTGGT TATCGCTGCG ATCGTTTTTG TTGAGCGCGG CCAGCGCCGA
TTGCCAATAC ACTATGCTAA ACGTGTCGTA GGGCTGAAGA CGTACGGTGG TCAGACGTCC
CACCTTCCTC TCAAGGTAAA TATGGCGGGG GTAATACCGC CGATCTTTGC TTCTTCGATA
ATTATGTTTC CTGCAACAGT GGCAAACTTC ATTAATATTC CCTGGGTCCA ATCCGCAGCA
AAGAGCCTGA CGCCCGGCAA CTGGGTATAT GACATATTTT ATGTTGCTTT TATCGTATTC
TTCTGTTATT TCTACACGGC TGTTTCTTTT AACCCCGTCG ATGTGGCAGA TAACGTTAAA
AAGCACGGCG GTTATATACC AGGCATTCGC CCCGGTAAGG AAACCTCCGA GTATTTGGAT
CGAGTGCTCA CGAAGTTGAC GTTTGCAGGT GCGATTTATA TTTCAGCTGT TTGCGTTCTT
CCTTCTATTC TTATAGGTAA ATTCAATTTG CCGTTTTACT TTGGAGGAAC GGCGCTCCTT
ATTGCGGTGG GTGTGGGGAT GGATACCGCT GCTCAGATTG AGTCCCATTT GATAACCCGG
AGTTATGAAG GGTTTATGAA GGGGGTAAGG GTTAGGGGGA GGAAGTAG
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| Protein sequence | MIEAFQNIFR IPELKKRVLF SLGMLAVYRV GCHIPTPGID STALAHFFAQ ARGTLLGLFD
MFSGGALEKL TVFALGIMPY ISSSIIFQLL TVVVPAIEKL SKEGESGRKK IIQYTRYGTI
VLSVVQALGI SIGLESMRGP AGELVVPSPG WGFRFMTVIT LTAGTAFIMW LGEQMSEKGI
GNGISLIIFA GIVARIPVAL GNSVRLLKTG QISLFVILFI LVLMFLVIAA IVFVERGQRR
LPIHYAKRVV GLKTYGGQTS HLPLKVNMAG VIPPIFASSI IMFPATVANF INIPWVQSAA
KSLTPGNWVY DIFYVAFIVF FCYFYTAVSF NPVDVADNVK KHGGYIPGIR PGKETSEYLD
RVLTKLTFAG AIYISAVCVL PSILIGKFNL PFYFGGTALL IAVGVGMDTA AQIESHLITR
SYEGFMKGVR VRGRK
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