Gene Gmet_0641 details

Gene Information

• Locus tag: Gmet_0641
• Symbol: rplF
• ID: 3738348
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter metallireducens GS-15
• Kingdom: Bacteria
• Replicon accession: NC_007517
• Strand: +
• Start bp: 706885
• End bp: 707424
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637777919
• Product: 50S ribosomal protein L6
• Protein accession: YP_383608
• Protein GI: 78221861
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0000000000903619
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 0.0000000381043
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGTCCAGGA TCGGCAAACG TCCTATTGAG ATACCGAGCG GGGTAAAGGT TTCGTACGTA 
ACTCCTATTC TGAAGGTCGA GGGGCCGAAG GGTTCGCTTT TACGCGAGAT TATGAGCGAC 
ATCGCCCTTG AGATAGAGGA GAAGAGTGTT AGTGTTAATA GAGCCGATGA TGCTATAAAG 
TCACGTTCGG CCCATGGCTT GACAAGAACG CTGATCAATA ACATGGTCGT TGGTGTAACT 
AAAGGGTTCG AAAAAATACT TGAGATAAAC GGCGTTGGTT ATAGGGCAGA GGCAAAGGGC 
GATGTTCTTA GCCTTAGCCT TGGTTACTCT CATCCGATTA ATTTTCCTCT CCCTAAAGGC 
ATAACGGTTG AGGTGGATAA AATGACCAAG GTCTTTGTCA GAGGGATTGA TAAAGAGCTC 
GTTGGCCAGA CTGCAGCCAA GATTCGTTCT TTCCGCGGTC CCGAACCCTA TAAGGGCAAG 
GGTATAAAGT ATGCCGACGA GAGAATTCTG AGGAAGGCCG GCAAGACCGG CAAAAAATAG 

 

Protein sequence

MSRIGKRPIE IPSGVKVSYV TPILKVEGPK GSLLREIMSD IALEIEEKSV SVNRADDAIK 
SRSAHGLTRT LINNMVVGVT KGFEKILEIN GVGYRAEAKG DVLSLSLGYS HPINFPLPKG 
ITVEVDKMTK VFVRGIDKEL VGQTAAKIRS FRGPEPYKGK GIKYADERIL RKAGKTGKK