Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0632 |
Symbol | rpsC |
ID | 3738339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 703414 |
End bp | 704049 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637777910 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_383599 |
Protein GI | 78221852 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00000111736 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00000000169292 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGGTCAGA AAGTAAATCC AATTGGATTC AGGCTTGGTG TAATCAGAAC ATGGGATTCG CGTTGGTATG CTGAAGCAGA TTATGCGAAG CTGCTTCATG AAGATATCAA GTTGAGGAAT TTCCTGAAAA AGCGCCTTTT TAACTCGGGT GTTTCCAAGA TCGAGATTGA GCGTGCTGCC AGTAAGGCGA AGATCAATAT CTTTACTGCT CGGCCTGGGC TTATAATCGG TAAGAAGGGT GCCGAGGTGG AAACTCTCAA GAAGGAGCTT GCCAAGCTTA CTGACAAAGA GATCTACCTC AATATACAAG AAGTCAGGAA GCCCGAGCTG GATGCTCAAC TGGTGTCGGA GAACGTAGCT CTCCAACTAG AGCGGCGCGT GGCTTTCCGC AGAGCAATGA AAAAAAGTGT AACTTCTGCG CTTAAGTTCG GTGCGAAGGG GATTAGGATT ACATGCTCTG GTCGCCTTGG CGGAGCTGAA ATGTCCCGAA CTGAGTGGTA CAGAGAGGGG CGCGTACCCT TGCATACGCT CCGGGCAGAT ATAGATTACG GCTTTGCTGA AGCCAAAACT ACCTATGGGA TTATTGGCGT AAAAGTTCTA ATCTTTAAAG GTGAAGTTCT CCCCGGTCAA AAATAG
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Protein sequence | MGQKVNPIGF RLGVIRTWDS RWYAEADYAK LLHEDIKLRN FLKKRLFNSG VSKIEIERAA SKAKINIFTA RPGLIIGKKG AEVETLKKEL AKLTDKEIYL NIQEVRKPEL DAQLVSENVA LQLERRVAFR RAMKKSVTSA LKFGAKGIRI TCSGRLGGAE MSRTEWYREG RVPLHTLRAD IDYGFAEAKT TYGIIGVKVL IFKGEVLPGQ K
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