| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0626 |
|---|
| Symbol | rplC |
|---|
| ID | 3739249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 700320 |
|---|
| End bp | 700952 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637777904 |
|---|
| Product | 50S ribosomal protein L3 |
|---|
| Protein accession | YP_383593 |
|---|
| Protein GI | 78221846 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0087] Ribosomal protein L3 |
|---|
| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0000331463 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000000000000331617 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGG GATTGATTGC GAAAAAGCTG GGTATGACCC AGATCTTTGC TGATGATGGC
AGGCGCATTC CAGTAACTGT AGTAGAGGCT GGGCCGTGTA TCGTCTTGCA AAAGAAGACT
GTTGAGACAG ACGGGTACAA CGCTATTCAG GTAGGTTTTC TCGCGAAGGA TGCCGACAAG
TCGGGGCGCG CGCTTGTAGG TCACTGCAAG TCCGCTGGCC AAGGTGTCTT TACTTATATC
CGTGAGTTCA GGGTGGAGGA TGTCGACAGG TATACTATTG GCGACTCTAT TACCGCTGAG
ATCTTTGCGC CGGGTGATTA TGTCGATGTG ACCGGAACAA GCATTGGTAA AGGTTTCCAG
GGTGTCATTA AACGGTGGGG CTTCCGTGGA GGCCGTTCAT CCCATGGTTC CTGCTTCCAC
CGGGCTCCCG GTTCGATCGG TAGTTCTGCA TGGCCGTCGC GCGTGTTCAA AAATAAGAAA
ATGCCAGGCC AACTCGGAAA TGAGCGTGTT ACGGTGCAAC GTCTTCAAGT TGTCCGTGTT
GACACAGCGG ACAATCTGCT GCTGATCAGA GGGGCAATAC CAGGCGCGAA GAATGGTATT
CTGCTTCTCA AAGACAGTGT TAAAGCACGT TAG
|
|---|
| Protein sequence | MKKGLIAKKL GMTQIFADDG RRIPVTVVEA GPCIVLQKKT VETDGYNAIQ VGFLAKDADK
SGRALVGHCK SAGQGVFTYI REFRVEDVDR YTIGDSITAE IFAPGDYVDV TGTSIGKGFQ
GVIKRWGFRG GRSSHGSCFH RAPGSIGSSA WPSRVFKNKK MPGQLGNERV TVQRLQVVRV
DTADNLLLIR GAIPGAKNGI LLLKDSVKAR
|
|---|
| |