Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0604 |
Symbol | |
ID | 3738951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 675149 |
End bp | 676168 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637777878 |
Product | aspartate semialdehyde dehydrogenase |
Protein accession | YP_383572 |
Protein GI | 78221825 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000000271293 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.00940362 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCAAAAC TGTGGAACGT GGCCGTCGTC GGCGCCACTG GCGCCGTCGG TGGCCAGATG ATCGAATGCC TCGAAGAGCG CAACTTCCCT GTGGGGAAGA TCCGCTACCT GGCCAGTGCC CGGAGCGCCG GCGAGGTGCT GGAGTTCAAG GGAAAGCCGG TGATGGTGGA AGAGCTGACC CGCGACTCCT TTGAGGGGAT CGACATCGCC CTCTTTTCGG CTGGCGGCGA CCGTTCCCGG GATTTCTGTC CCGCGGCGGC AGCTGCCGGC GCCGTTTGTA TCGACAACTC CAGTGCCTGG CGGATGGATC CGGACGTGCC GCTGGTGGTT CCCGAGGTGA ATCCCCACGC CATCGCCGAC TACCGGAAGA AGGGTATCAT CGCCAACCCC AACTGCTCCA CCATCCAGAT GGTGGTGGCC CTGAAGCCGC TCCACGACCA CGCTGTCATC AGGCGGATCG TGGTCTCCAC CTACCAGGCT GTTTCCGGCA CCGGCAAGAA AGCTATTGAA GAGCTACAGA AACAGGTGGT CACCCTTTTT CAGGGGAAGT CGCCGGAAGT GGCGACCTAC CCCCACCAGA TCGCCTTCAA CTGCCTTCCT CAGATCGATT CCTTCGGTGA CAACGGTTAT ACCAAGGAAG AGATGAAGAT GGTGCACGAA ACCCGGAAGA TTCTTGAGGC GAACATCGGG GTAACCGCCA CTGCAGTTCG AGTGCCGGTC TTCTACGGCC ACTCCGAGTC AGTGAATATC GAAACCGAGA ACAAGCTGAC CGTGGCCACG GCCCGCGAAC TTCTGGCAAA GGCGCCCGGG GTGGAGCTGG TGGACGATCC GGCCACGTCA TCCTATCCCA TGGCCATCGA CGCTGCCGGC CAGGACCTGA CCCTCGTGGG GCGAATCCGT GAGGACGAGT CCATCGCCAA CGGCCTCAAC CTCTGGGTGG TGGCGGACAA TATCCGCAAG GGTGCGGCCA CGAATGCCGT CCAAATCGCC GAGATTCTGA TCGAAAAGTA TCTCAGGTAG
|
Protein sequence | MAKLWNVAVV GATGAVGGQM IECLEERNFP VGKIRYLASA RSAGEVLEFK GKPVMVEELT RDSFEGIDIA LFSAGGDRSR DFCPAAAAAG AVCIDNSSAW RMDPDVPLVV PEVNPHAIAD YRKKGIIANP NCSTIQMVVA LKPLHDHAVI RRIVVSTYQA VSGTGKKAIE ELQKQVVTLF QGKSPEVATY PHQIAFNCLP QIDSFGDNGY TKEEMKMVHE TRKILEANIG VTATAVRVPV FYGHSESVNI ETENKLTVAT ARELLAKAPG VELVDDPATS SYPMAIDAAG QDLTLVGRIR EDESIANGLN LWVVADNIRK GAATNAVQIA EILIEKYLR
|
| |