Gene Gmet_0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0603 
Symbol 
ID3738950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand+ 
Start bp674045 
End bp675145 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content63% 
IMG OID637777877 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_383571 
Protein GI78221824 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00000993095 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0158721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAG GAATCGTCGG TTGGCGCGGT ATGGTCGGTT CGGTTCTCCT CCAGCGGATG 
GTGGAGGAGG GGGATTTCAA CACCGGCATC GAGCCGGTTT TCTTCAGCAC CTCCCAGGCG 
GGGCAGCCTG CCCCCATGAA TGCAGGCACC CTCAAGAGTG CCGATGACAT TGAAGAACTG 
AAAAAGCTCG ACATCATCGT TACCTGCCAG GGTGGCGACT ACACCAAGGC CGTCCACCCG 
GAACTCCGCA AGCAAGGGTG GCAGGGATAC TGGATCGACG CGGCCTCCAC CCTCCGGATG 
GAGCCGAATG CGGTCATCAT CCTCGACCCG GTGAACCGCA ACGTCATCGA CGCGGCCCTG 
GCCAAGGGGC AAAAGGATTT CATCGGCGGC AACTGCACCG TGAGCCTCAT GCTCATGGCC 
TTGGGAGGGC TTTTTCGGGC CGGCCTCGTG GAGTGGCTCA CCTCCATGAC CTACCAGGCT 
GCTTCCGGCG CCGGTGCCCC CAACATGCGC GAACTCCTCT CCCAGATGGG AACCCTCCAC 
GGTTCCGTGG CTGACCTCCT CAAGAATCCC TCGTCGGCCA TCCTCGACAT CGACCGGGAT 
GTGACCGCCA CCCTGCGCGG CGACGCCCTG CCGACGAAAG AGTTCGGCTT CCCCCTGGCT 
GGCAGCGTCC TTCCCTGGAT CGACCGGGAG GTGGAGGACG GCCAGAGCCG GGAGGAGTGG 
AAGGGCTTCG CCGAGACCAA CAAGATCCTC GGCACAACCA CCCCGATCCC GGTGGACGGC 
ATCTGCGTCC GCGTCGGCGC CATGCGCTGT CACAGCCAGG CCCTGACCAT CAAGCTGAAC 
AAGGACGTCC CCCTGGGCGA TATTGAAGAG CTGATCAAGA ACGACAACCA GTGGGTCAAG 
TTCGTCCCCA ACACCAAGGC CGACACCTTG GCCGACCTGA CCCCCGCCGC GGTATCCGGG 
CTTCTCACAG TCCCTATCGG CCGGGTCCGC AAGATGAAGA TGGGCCCCCA GTACATGCAG 
GCCTTCACCT GCGGCGATCA ACTCCTCTGG GGGGCTGCCG AGCCCCTGCG CCGGATGCTC 
CGTATCCTCG TGGAGAAATA A
 
Protein sequence
MKVGIVGWRG MVGSVLLQRM VEEGDFNTGI EPVFFSTSQA GQPAPMNAGT LKSADDIEEL 
KKLDIIVTCQ GGDYTKAVHP ELRKQGWQGY WIDAASTLRM EPNAVIILDP VNRNVIDAAL 
AKGQKDFIGG NCTVSLMLMA LGGLFRAGLV EWLTSMTYQA ASGAGAPNMR ELLSQMGTLH 
GSVADLLKNP SSAILDIDRD VTATLRGDAL PTKEFGFPLA GSVLPWIDRE VEDGQSREEW 
KGFAETNKIL GTTTPIPVDG ICVRVGAMRC HSQALTIKLN KDVPLGDIEE LIKNDNQWVK 
FVPNTKADTL ADLTPAAVSG LLTVPIGRVR KMKMGPQYMQ AFTCGDQLLW GAAEPLRRML 
RILVEK