| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0601 |
|---|
| Symbol | |
|---|
| ID | 3738948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 671608 |
|---|
| End bp | 672657 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637777875 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_383569 |
|---|
| Protein GI | 78221822 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000000425855 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.13133 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCA TCGGGATCAC ATTCATCGCG CTCCTCGCTT TGGCCGCTCC GGCCATGGCG
GGACACGTGG CAACCATAGG GACGGGCACG TGCGGTTCCT GTCATCGAAC CAATCTGGTC
ACCCAGCACG GCGGTTTTGT CGCCACCGTC TGCCAGACCT GCCATGACAG CACCGTTGCT
GCCGTCAAGG ATACCATTGC CACTGGTGTG GCGGGACAGC CCTATACCTG CTCCAACTGC
CACGGGGCCG AGACGCATTT GAGCAAGCAT GGTGATTACG CCGCGAATTT CGCCGCCTAT
AACGGCGTGG AACCGGTTAC CAGTGGGATC TGGACGGCAC CGTCATCGTA CACAAAGGTT
ACTCCTGCAA CCAAGGAGTA CCAGGTATGC GTCAAGTGCC ACTCATCCAA CGGTCTTGGT
TCAACCACCA ATAGCGTGAG CGGCGTGACG GGACCGTCGG GGCTGCTTCT TACCGACCAA
GCCATGGAAT TCAGCCAGTA TAACCGCTCC GGCCACCCCA TTGTCACCGG TCTCAACAAT
TACCCCAATT CTCCCGCGCC CAAGGCCCTT GTGAAGACTC AACTGTCTTC GCCCTGGAAC
GTCAACATGG GCAAGCAGAC AATGAAGTGC TTCGACTGCC ACGGCGCCGA TGGCAAGTTG
GTTGGCGTCG GCAGGGACTG GCCCTACAAC TCCGCCACCG GCCAGCTCTG GAAGCTCGGT
GACGCCAGCA ACAGCAAGCT GTTCTGCAAG AACTGCCACC CCCTCGTCAA TACGAACAAC
ACGCACTCGG AAAGCAACCA CTCTAAATAC CCCTGCGTGT ATTGCCACAC GCGGGTACCC
CATGGCGGCA AGGTAAGCCG GTTGATTGTG ACCTTCACTT CGGGACTGCC AAGCCGGTAC
TATCCTGACG GGAAAGGTGG CGGGACCCCC AGCTTGCAGG ACAAATTGTT GCGCTACACC
AAGGCGACAT CGGCAAGCCG CTATGACACG CCGTCCTGCG ACGCGGATTG CCACGGCTCC
CACCAGAACA CAACCGGTGA GGCCTGGTAG
|
|---|
| Protein sequence | MKRIGITFIA LLALAAPAMA GHVATIGTGT CGSCHRTNLV TQHGGFVATV CQTCHDSTVA
AVKDTIATGV AGQPYTCSNC HGAETHLSKH GDYAANFAAY NGVEPVTSGI WTAPSSYTKV
TPATKEYQVC VKCHSSNGLG STTNSVSGVT GPSGLLLTDQ AMEFSQYNRS GHPIVTGLNN
YPNSPAPKAL VKTQLSSPWN VNMGKQTMKC FDCHGADGKL VGVGRDWPYN SATGQLWKLG
DASNSKLFCK NCHPLVNTNN THSESNHSKY PCVYCHTRVP HGGKVSRLIV TFTSGLPSRY
YPDGKGGGTP SLQDKLLRYT KATSASRYDT PSCDADCHGS HQNTTGEAW
|
|---|
| |