| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0594 |
|---|
| Symbol | |
|---|
| ID | 3740603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 661203 |
|---|
| End bp | 662030 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637777868 |
|---|
| Product | cytochrome c assembly protein |
|---|
| Protein accession | YP_383562 |
|---|
| Protein GI | 78221815 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGCT CTTTTTCGTC AATAACCATC ATCCATTGGG CGGCAGTGGT CATCTACGTG
CTCGCCACCA TCTTCAACGT GGCAGGTCTC ATCTTCCGCA AGGAACGCGC CACGGGGATC
AGCTATCTCC TGGTGGGGGC GGGGCTTCTG GTGCACGGCA TCGGCATCCT CTGGTGGTGG
AAGATTGTCG GGCACGGCCC GTACATCGGC CGGTTCGAGG TCCTCTCTTC CCAGGCATGG
ATGGGGCTTT TCCTCTTCAT GGTCTTTGCC CACTTCCTGC CGAAGATAAG GCCGGCGAGC
ATCCTGGTGT TTCCGGCCGC CTTCCTGATG ATCGCCGTCG GCATCTTCTT CGAGCCCCAG
GTGAAGATGC TGCCGCCGAC GCTGCGCAGT GTCTGGCTCA TCCTCCACGT GACCTTCTAC
AAGATTTCGG TCTGCACGCT CCTGGTGGCC CTGGCCTTTT CCATCTTCTT CATCCTGCGC
AAGCGCACCG GCATCCAGTG GCTTACCCGC CTCCCCGACA TGGAGACCAT GGATATTCTC
GCCTTCCGCT TCGCCGGCTT CAGCTTCACC TTTTGGGCCA TCGCCATGCT GGCGGGGAGC
ATCTGGGCCT ATGAATCGTG GGGGCGCTTC TGGGGGTGGG ACCCCATCGA GACCTGGTCG
CTCATTACCT GGGTGGCCTT CGGTATCTAC CTGCACCTGC GGCGCTTCTT CGGGCTGAAG
GGGGAAGCGG CGGCTTACCT CTACATCCTC TGCTTCCTGC TGTCGGTCCT CTCCCTCTTC
TTTACGCCGC TGATCGGTGG CTCGGTCCAT TCTGAGTACT TTAAATGA
|
|---|
| Protein sequence | MESSFSSITI IHWAAVVIYV LATIFNVAGL IFRKERATGI SYLLVGAGLL VHGIGILWWW
KIVGHGPYIG RFEVLSSQAW MGLFLFMVFA HFLPKIRPAS ILVFPAAFLM IAVGIFFEPQ
VKMLPPTLRS VWLILHVTFY KISVCTLLVA LAFSIFFILR KRTGIQWLTR LPDMETMDIL
AFRFAGFSFT FWAIAMLAGS IWAYESWGRF WGWDPIETWS LITWVAFGIY LHLRRFFGLK
GEAAAYLYIL CFLLSVLSLF FTPLIGGSVH SEYFK
|
|---|
| |