| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0583 |
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| Symbol | |
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| ID | 3740592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 646169 |
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| End bp | 648682 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637777857 |
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| Product | spermine synthase |
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| Protein accession | YP_383551 |
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| Protein GI | 78221804 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGAAGC CTCTACGGCC CGGAGTTCAG CTCCTGCTCT GCCTGATTGC CTATTTCTCC
TCCGGTGCGG CGAGCCTCTG TGCGGAAGTT ACCTGGAACC GGATGCTCAT CGTGGTGGTG
GGCAATTCCC TCGCCGCGAC CTCCATGATC GTCGTGGTCT TCATGGGGGG GCTCGGCCTC
GGGGGGTATG CCGGCGGGAA GCTCCTGGCG CGCCGCCGGT GCTCGCTGCT TCCCTACGCG
ATCCTTGAAG TTCTCATTGC CGCCTACATC CTCCTCTCGC CAATCCTCTT CGACCTCCTT
GCCGGTGCCT TCTCCTCCCT GGCCGAGCAG TGGGAACAGC CGGCGCTGCT GAGCCTGCTG
CGGTTTGCCG TCACCGTGGT GGCCCTGTTG ATCCCGGCGA CCCTCATGGG GGCGACGTTC
CCCGCCATCA TGACCGGGGT GCGATCCAGG TATCCCGAAA ACAGCCATGC GCTCCTCTAT
GGCGTGAACA CCGTGGGGGC GGCGGTGGGC TGTTTCGTGG GGGGGTATCA TCTGCTCTTC
GAACTGGGGG TTCAGGCAAC GCTCTGGCTG GCCGCCGGAC TTGGCGGCGT ATCAGTCCTC
TGTGTGGCCG TGGCAGCGGT TCTGTCTCCG TCTCGGGCCT GTTTCCAGCT CGCTCCGGAG
CCGGAGGTGG CCGACGAAGG CACTTCTGCT TCCGGCGAGG GGGGGCTGTT CCGGTTCCTG
GCGGTTTCCT CCTTCCTAGT TGGGTTTGTG GCCCTTGCCT ACGAGGTGCT GGTCACCCGG
ATGGTGATTC TCTTTCTGAA CAATCTGGCA TCCACGTTCG CGCTGGCCCT GACCGGCTTC
CTGCTGGGGA CCGGCGCCGG GGCGCTGCTG GCCAACGGCG CCCATGCCGC AAATAACAGG
ATCGGCGGGA ACGGGGTGCG CCTGTTCGGG GCCATTGCCC TGTTGTCGGG CATCCTGCTA
GCTGCGACCC CCTATGCTAT CATGGCGGCC AGCTACCCGC TGCAGGCCCT CGGCATCATC
GTCATCCCGA TGGTTTTTCT CGGCTCGCTG CTCCCCTTCG CCATCCGGAC CCTGCACGCG
AGGGATCGCG AAGCCGCGAT CCGGGGGACC TCCTTCCTGT ACGCCGCCAA TACGGTCGGC
GGGATGCTGG GGGCCGGCCT CATCAATTAT CAGCTTCTGC CGAGGATCGG CCTGCAGGGA
TCGGTCGGGC TCCTGTTCGG CATCTGCGCC GCCATTGCCG TCGCCTGCTT CGTCCCGTCC
CTGACCCGCG GCTTCAGGTG GGCGACCCTG CTGCTGGTTC CGGCGCTCAT GCCGCTCATC
ACGCTGAATG CCCTGCCGAA CATCATGAAC CGCTATGCCC TGAAGATCGC CGAGTGGACC
GGGGCCCCCG AGGTTACGAT CAGGCTTATT CACGAAGGGC GCGCCGCCAA CGTGACGGTG
CTCGATCAGA ACGATCCGAA GCAGGGGGAA TTCCGGGACA TGTATCTGAA CGGCATCGAG
GAGGCGTCGA CCCGCTTCTA CCACGCCCAG CTCTTCAAGC TCCTGGGGAT GCTTCCGGTT
GTCGTCCATG GGGCCGAACG GCCCCAAAAC GCCCTCGTCA TCGCCTTCGG CTCGGGGATT
ACCGCCGGGT CGGTCCTGGC GTCCGATATG ATCTCTTCCC TCGATGTGGT CGATCTGAAC
CCCGATGTGG AGGGGATCAA CAATCTGTTC AAGGAATTCA ACGGCGACGT GTTCCACGAG
CCCCGCTTCC GCTTTCACAA TGACGATGGC AGAAATTATC TGGTGACCAG CGGGAAAAAA
TACGATCTGA TCATCAGCGA CTCGACCCAC CCCTGCTCCT ACGACAGCTG GATCCTGTAC
ACCCGGGAGT TTTATCGCGA TGTGAAGCGG CGCCTCCCCC CGGGCGGCGT CTTTGCCCAG
TGGGTCTCCG TCTCCGAGAT CATGCGGGGC GAGCTCTTCC CGATCTATCT GAATACCTTC
CGGAGCGTCT TTCCCCATGC GACCTTCTGG TATGTTTACG GGTCGAACCA GGCCCTGATG
CTCGCCACGC CGGAACCGTT CAGGCTCGAT GCCGGCAAGC TCCAGAAGCG CCTGGACCGG
CTCGCCCCCT GGTTCAGGGC CGGGGAATAC CAGCTCGATT CAGTCGCGAA GGTGGCGGGC
TTCTTCTGGC TTGATGAAGA GATGATGGGC CGGATGATCG GCGCCGAGAC CCGTGTGAAC
ACGGATATGC GCCATTATTT CGAGAAGTCC TCCATGCAGG CCCAAATCCC GCCGCAACGG
CAGCTTCCCT TTTTCCAGGC CGATGTCACG CGGTATCTCA CCGGTGGTGA TGAACGGCTG
CGCAGCGACA TCCGAAAGGA GCAGAAGACG GGGTTGCTGC TGACCAGGTA TGGTTTCTAC
AACGATATCA GAGACCTTGG CCAAGCTTAC TGTTTAAGTC CTGAGAACAA TAACGTAAAA
TACTGGATGA GATTCGCCTA TTCCGGAAAT ATCCCCGCGG GACTGTGCCC CTAG
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| Protein sequence | MTKPLRPGVQ LLLCLIAYFS SGAASLCAEV TWNRMLIVVV GNSLAATSMI VVVFMGGLGL
GGYAGGKLLA RRRCSLLPYA ILEVLIAAYI LLSPILFDLL AGAFSSLAEQ WEQPALLSLL
RFAVTVVALL IPATLMGATF PAIMTGVRSR YPENSHALLY GVNTVGAAVG CFVGGYHLLF
ELGVQATLWL AAGLGGVSVL CVAVAAVLSP SRACFQLAPE PEVADEGTSA SGEGGLFRFL
AVSSFLVGFV ALAYEVLVTR MVILFLNNLA STFALALTGF LLGTGAGALL ANGAHAANNR
IGGNGVRLFG AIALLSGILL AATPYAIMAA SYPLQALGII VIPMVFLGSL LPFAIRTLHA
RDREAAIRGT SFLYAANTVG GMLGAGLINY QLLPRIGLQG SVGLLFGICA AIAVACFVPS
LTRGFRWATL LLVPALMPLI TLNALPNIMN RYALKIAEWT GAPEVTIRLI HEGRAANVTV
LDQNDPKQGE FRDMYLNGIE EASTRFYHAQ LFKLLGMLPV VVHGAERPQN ALVIAFGSGI
TAGSVLASDM ISSLDVVDLN PDVEGINNLF KEFNGDVFHE PRFRFHNDDG RNYLVTSGKK
YDLIISDSTH PCSYDSWILY TREFYRDVKR RLPPGGVFAQ WVSVSEIMRG ELFPIYLNTF
RSVFPHATFW YVYGSNQALM LATPEPFRLD AGKLQKRLDR LAPWFRAGEY QLDSVAKVAG
FFWLDEEMMG RMIGAETRVN TDMRHYFEKS SMQAQIPPQR QLPFFQADVT RYLTGGDERL
RSDIRKEQKT GLLLTRYGFY NDIRDLGQAY CLSPENNNVK YWMRFAYSGN IPAGLCP
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