Gene Gmet_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0580 
Symbol 
ID3738237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp633445 
End bp636054 
Gene Length2610 bp 
Protein Length869 aa 
Translation table11 
GC content62% 
IMG OID637777854 
Producthigh-molecular-weight cytochrome c 
Protein accessionYP_383548 
Protein GI78221801 
COG category 
COG ID 
TIGRFAM ID[TIGR01904] Geobacter sulfurreducens CxxxxCH...CXXCH domain 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTACGG AGAATAGAAC GAAACGAACC TCTGGTGCAG TACCAGTGCT GGTTGCCTTT 
GCGGCTTCGA TGGCGCTGGT ACTCTTCGTT TTGTGCGGTA CGACCCCTGT CCACGCTGGA
ACCATCACCA GCTGTTCCGG CTGTCACGGC ATGCCGCCGG CGGACGCCGC CTTCCGCAAC
ATCTCCACCG GCGGCTTTGC CGGCAATCAC GGTACCCATC TCGGCGCTTC CGCCAGTGCC
GGCGACTGTA CCAGGTGCCA CAATAATTCC GGTTATCTCA ACAGCCACCG GGACGGCAAA
ATTCAGCTGG CGTCCAATAT CAATACCTCG CCGGCTCCCG GCGGCGGCCT GTACAAGGTA
TCCGGATCGG CAGTCACCTT CTGGAACCAG ACGTCCATTC CGGTCCCCGG GTCATGCAGC
AACGTCAACT GCCACTTCGA GGCGGCAACT CCCCTGTGGG GCTCCACGGC GTTCACCTCT
CCGGCCGATT GCAATAAATG TCACGGCGCC CCGCCAAGTG GCGGAACATC GGGCGCGGCC
GGCAGCCACT CCCGGCACGA CCAGTACTAT GCCGGTGTCG CCAACTGCCA GAAGTGCCAT
TCAAACAATA CGACCTTCCA GCATGCCACC AGCGCCGGGC ATCGCAATCT GAACATCAGC
TTCGCCGCCG CCCCCAACAA CGGCAGCGGC GTCTATTCCG GCCCCCTCAA TGATTACCTG
CCGAGCCAGA TCAATGGGTT CGGCACCTGC ACCAGCCTCT ACTGCCACAG TAACGGCCAG
AAAAGCATGG GCAACTTCTC CACCGTCACC GTACCGACCT GGGGAACCCC CCTGCCGGCC
AACTGCACGG GGTGCCACAG GTCCAACAAC GCCTCCGGCA ACGCCATGGC CACCGGCAGC
CATAAACGGC ACGTGGGTAC TGATTCGCAA GGTTATTCAA ACAACATAGC CTGTGCAAAG
TGCCATGCCG CCACGGTCAA CGGCACCATG GCCATTGCGG ACACCACCGT CCACGTCAAC
GCCAAGGTTA ATATCAAGTT CAACAGCCTC ACCACTGCCG TCAACGGCAC CTATGGGGGC
CAGGCGACCC CCTATGCCAA GGATCCTGGC ACCGCTTACG GCCAGTGCAA CAATGTCTAC
TGCCATTCGA ACGTCCAGAA CGACGGCGGG GTCGGCATAA CCTACCGGCA GCCCACGTGG
GGCAATGGGG CGAGCGGCAC CTGCGGCACC TGTCACGGCG GCGGCAACCA CTTTATGGAG
GCTGATATTG CGACCGGCAG CCATACCAAG CATCTGTCAT CGACAGCGAC TCCCTATACC
ATGGCGACAC GCTGCATAGT CTGTCACAAC GTCGGCGGAT TGCCGTTCAA CGGCAGCTGC
AACAATTCGT GCCATAGCGG GCTATCGCGG CACACTGACG GGAAGATAGA CCTTGCGTTC
CCGTCCAATT TCGGTGCTAC GGCGGCCTAC AACGGCACCC CGAGGCCGGG CAACGGCTAC
AGCACCTGCT CCAACGTCAA CTGCCACTAC AGCACCACCA CCCCGACCTG GGGAACGTCG
ACCCCCATCG GCTGCCTCGG CTGCCACACC CTTGCCGTGC TGCGGGCCAG CGGCGCCCAT
GCCAAGCATA TCAGCGCCAC CGCCTCGCCG ACCATGTACA ACTACACCGC CAACCGCTCC
ACGGCGACGG AATACGACTT CGGCTGCTCC AACTGCCATC CTGTCACCGC AACGGGCAAT
CACTACAATT CGGTCATCAA CGTGACCCTC AAGAAGGATG AGGCCGGGGT GGGCTCCCTG
CGCGCCAAAA ACAGTGCCAC GGCGGTCGGC GTCAACGTCG CCAACAGCGG CATCACCGGC
ACAACCAAAG TCAGCATCAG GTGCTCGATG GCCTACTGCC ACAGCAACGG CAACGCCGCC
GGCCTGGTCT ACGCCACCAC GCCGGACTGG TACGGCGGCA GCTTCACCGG CGACCGCTGC
GCCAACTGCC ACGGCAACGC CCCCAACACC ACCATTGCCG GTTCCAAGTC CCACTACAAC
AACCGCTTCC TCGGCTACAC CAGCAACCCG GGGGGGCACC AGATTGCAAT CCATGCCATG
GGGATCTACA GCAGCCCGAG CGGCCTGGCC AAGGCGGGCA CCGGCAATGA CAGCAGCCAC
GGCAATGCCG CCACATCAAC AACCATCGGC TGCAATATCT GCCACTACCT GACGGTCACC
ACCGCCCGCA ACGATGACAA CTTTGTCTGC AAAACCTGCC ACTATGCCGG CAATACCGTG
GGCGCCCTGG CCGGAAACCC GGCCGCCATC GCCGACCGGT CGAAGCACGT CAACGGAACG
GCCGATGTGG CGTTCCAGCC GGTTACCGTG CTTTCCAAGG CGCAGATGCG GCAGATCTAC
TTCACGTCAT ACAGCGGCAC CTTCAAGCGC AACGGCGTGT ACAAGACCTC CGGCGCGTAC
GACTCCGCCA AGGCAGCGCT CAACACGGCA ACCATGTGGG ACGGCGGCAG CAAGACCTGC
TCCAATGTCG CCTGCCATAA CAGCCAGAGC GTGAAATGGA CCGATAATGA CGGCGCGACA
ACGTGTGTCA ATTGCCATAA CGCCATGTAA
 
Protein sequence
MGTENRTKRT SGAVPVLVAF AASMALVLFV LCGTTPVHAG TITSCSGCHG MPPADAAFRN 
ISTGGFAGNH GTHLGASASA GDCTRCHNNS GYLNSHRDGK IQLASNINTS PAPGGGLYKV
SGSAVTFWNQ TSIPVPGSCS NVNCHFEAAT PLWGSTAFTS PADCNKCHGA PPSGGTSGAA
GSHSRHDQYY AGVANCQKCH SNNTTFQHAT SAGHRNLNIS FAAAPNNGSG VYSGPLNDYL
PSQINGFGTC TSLYCHSNGQ KSMGNFSTVT VPTWGTPLPA NCTGCHRSNN ASGNAMATGS
HKRHVGTDSQ GYSNNIACAK CHAATVNGTM AIADTTVHVN AKVNIKFNSL TTAVNGTYGG
QATPYAKDPG TAYGQCNNVY CHSNVQNDGG VGITYRQPTW GNGASGTCGT CHGGGNHFME
ADIATGSHTK HLSSTATPYT MATRCIVCHN VGGLPFNGSC NNSCHSGLSR HTDGKIDLAF
PSNFGATAAY NGTPRPGNGY STCSNVNCHY STTTPTWGTS TPIGCLGCHT LAVLRASGAH
AKHISATASP TMYNYTANRS TATEYDFGCS NCHPVTATGN HYNSVINVTL KKDEAGVGSL
RAKNSATAVG VNVANSGITG TTKVSIRCSM AYCHSNGNAA GLVYATTPDW YGGSFTGDRC
ANCHGNAPNT TIAGSKSHYN NRFLGYTSNP GGHQIAIHAM GIYSSPSGLA KAGTGNDSSH
GNAATSTTIG CNICHYLTVT TARNDDNFVC KTCHYAGNTV GALAGNPAAI ADRSKHVNGT
ADVAFQPVTV LSKAQMRQIY FTSYSGTFKR NGVYKTSGAY DSAKAALNTA TMWDGGSKTC
SNVACHNSQS VKWTDNDGAT TCVNCHNAM