| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0559 |
|---|
| Symbol | |
|---|
| ID | 3738393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 601354 |
|---|
| End bp | 603852 |
|---|
| Gene Length | 2499 bp |
|---|
| Protein Length | 832 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637777833 |
|---|
| Product | parallel beta-helix repeat-containing protein |
|---|
| Protein accession | YP_383527 |
|---|
| Protein GI | 78221780 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCT CATTGTTCAG GATTGCTTTC GTCTGCACGG TGCCGATACT CGCGCTGCTG
GTGCTGCTGG CGCCTCGGAG CGCGTCTGCC GGCGTCATCA CGGCCGATAC GGTCTGGACG
GGGAGCGTCA CGGTGACCGA AGACGTGCTC GTCCCCGAAG GGGTCACCCT GACCGTCCGC
CCCGGCACCT CCATAACGGT TGTTGCGGCG GAAAGCACCA AGACCGATCC AGAGTACCTC
TCTCCCCTTA ATGAAATAAC CGTGCGAGGC ACCCTGACAG TGGAGGGGAC GGAAAAGGAG
CCGGTCCGGT TTTCCGGCGC GGAAAAAAAG AAGGGGAGCT GGGCCGGGAT TCTCGTCGAT
GGCGGCACGG CCGCGATCCG AGGGTGTCGT ATTTCTGACG CGGACACCGG CGTTTCGGTG
ACGGATGGAA CGCTCCGGCT GACCGGATCG GCGCTGTTGG AGAACCGGTA CGGTCTCGTG
GTGCAGGGGA CAAAGGCCCG GGTTGCCGTG GCCGACTCGC GGATCACTGG CAACGATTAC
GGTATCTTCA CCCTCCAGGG GGCCCGGGTG GCAACCAGCG CCACGGAGGT GGCTCGCAAC
GGGAAGAAGG ACACCTACGC GGCAACCTCT CGTGGGCAAA TCCCCCCGAA GGCGCAGCCA
GTCAACGATG GCGCGCCCGT GGGCCGTCGC TACCGCGACA TGGTCCTCCT GGGGGAAACC
GTCTGGCAGG GAAGGATCGA GATCGACGGA ACGGTGCGGG TCCCCGAGGG GAGCAGGCTG
GTCATCCTGC CGGGAACCAT CGTCGAGTTC ACCCGGCGGG ACACCAACGG CGACGGCATC
GGCGAGAACG GCATCATGAT CCAGGGGCGT CTTGTGGCCA AGGGGACGGC CGAGCGCCCC
ATCACCTTCC GCTCGGCCGC GAAGGTGCGA CGGATGGGGG ATTGGGACGC TGTCAATATT
ATGAACAGCT CAACGGGCCA GAACCTCATC GAGTACTGCC GGATCGAGGA TGCCTATCGG
GGGCTCCATT TCCACTTCTC CACCGTGGCG ATCCACAACA CCACCCTCAC CGGCAATTAC
CGGGGCATCC AGTTCCAGGA ATCGATGGTG GTGATGCGGG GCAACACCCT CTGCGGCAAT
CGGAGCGGCG TCCAGGGGCG GGATTCCGAG GTGGAGCTGA CGGACAACCT CATCTGCACC
AACCAGGTGG GGGGGAATTT TTTCCGGACC ACCCTCACGG CCCAGGGGAA CAGGATCGTC
GCCAACGGGA GAGAAGGGCT CCGCGTGCGG GAGGGAGCCG CCACCCTTCG GGAAAACCTC
CTCGACGGCA ACCGCTTCGG CCTCCTGGTG GCCGACCTCT ACCACGGCGA AGTGAGCCGC
AACAGCATCA CCAACAACAC CGAAACCGGT ATTTCCCTCA AGAACGTCGA CACCATCGAC
ATCGCAGGCA ACGTGGTGGC GGACAACGGA TTGAACGGCT TCAATATCCA GGACTGCGGC
GCGCTCATCA CCGGGAACCT GGTCACCGGC AACGGCGAGC GGGGGATGGG AATCCAGTCC
TTTGCCGGGC GCATCAGCGG GAACGACTTC GGCGGGAACG GCCTCTACGC CATTGACCTG
GACGGGAAGG ACGACGTGGC CGCCCCGGGC AACTGGTGGG GAGGGGACGA TCCGGCGCGG
GTCGTTTTCG ACCGGCACGA TGATTCGGCG CTGGGGCTTG TCCACTATGA TACGGCCAGT
GCCGCACCCA TCCCCTTTGT CTGGCCGCTG CCATTTGTGG CCTCAGATGC GGTCTGGCGC
GGCGTCATCA CCGTTGCCGC GCCCACAACG GTCCTCCCCG GCGCGGTCCT GACCGTGGCC
CCGGGGACGA CGGTGCAGTT TGCCGGCGGC GCGGGGCTCG AAGTCAAGGG CAAGCTAATT
GCAGCGGGAA AGCGGGACAG CAGGATCGTC TTCACCTCCG TGGAACGCAA GGGTGCCTCG
GACTGGAACG AGATTCTGCT GGAATATGCC ACCGGCAGCG TCATTGCCCA CTGTCTCGTC
GAGTACGCCA CCTGGGGCAT TCACAGCCAC TTTACCGATC TCTCCGTGTC TGATAGCGTC
ATTGCGCACA ACTATGGCGG CATGCGCTTC AGGAGCGGCC CGGTACAGAT CCGCCGCTCC
CTCTTCCGGG ACAACACCAT CGGCATCAGG TCGTACATCG GCAACGCCCT CATCGCGGAC
AACCTGATCA CGGGGAACGA GACAGGAATC TTCGTCCGGG AAAAGGGGGG CGGGCTGACG
GTGACGGGAA ACAGCATCTC CGGCAACAGC GGCTATAACA TGCGGATCGG CGATTTCAAC
GACGAGGACG TGAATGCCCG GGGGAACTGG TGGGGCGAGG GAGACCCCGG CGAGACGATC
TTCGACGGCC GGCAGGAGCC GGGGATCGGG ATGGTTCTCT TTGAGCCGCA CCTGACGAAA
CCTCCCACCG TTGGTCCCGG AAGCGGAGAA ACGCCATGA
|
|---|
| Protein sequence | MTISLFRIAF VCTVPILALL VLLAPRSASA GVITADTVWT GSVTVTEDVL VPEGVTLTVR
PGTSITVVAA ESTKTDPEYL SPLNEITVRG TLTVEGTEKE PVRFSGAEKK KGSWAGILVD
GGTAAIRGCR ISDADTGVSV TDGTLRLTGS ALLENRYGLV VQGTKARVAV ADSRITGNDY
GIFTLQGARV ATSATEVARN GKKDTYAATS RGQIPPKAQP VNDGAPVGRR YRDMVLLGET
VWQGRIEIDG TVRVPEGSRL VILPGTIVEF TRRDTNGDGI GENGIMIQGR LVAKGTAERP
ITFRSAAKVR RMGDWDAVNI MNSSTGQNLI EYCRIEDAYR GLHFHFSTVA IHNTTLTGNY
RGIQFQESMV VMRGNTLCGN RSGVQGRDSE VELTDNLICT NQVGGNFFRT TLTAQGNRIV
ANGREGLRVR EGAATLRENL LDGNRFGLLV ADLYHGEVSR NSITNNTETG ISLKNVDTID
IAGNVVADNG LNGFNIQDCG ALITGNLVTG NGERGMGIQS FAGRISGNDF GGNGLYAIDL
DGKDDVAAPG NWWGGDDPAR VVFDRHDDSA LGLVHYDTAS AAPIPFVWPL PFVASDAVWR
GVITVAAPTT VLPGAVLTVA PGTTVQFAGG AGLEVKGKLI AAGKRDSRIV FTSVERKGAS
DWNEILLEYA TGSVIAHCLV EYATWGIHSH FTDLSVSDSV IAHNYGGMRF RSGPVQIRRS
LFRDNTIGIR SYIGNALIAD NLITGNETGI FVREKGGGLT VTGNSISGNS GYNMRIGDFN
DEDVNARGNW WGEGDPGETI FDGRQEPGIG MVLFEPHLTK PPTVGPGSGE TP
|
|---|
| |