| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0558 |
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| Symbol | |
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| ID | 3738392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 597996 |
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| End bp | 601106 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637777832 |
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| Product | cytochrome c family protein |
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| Protein accession | YP_383526 |
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| Protein GI | 78221779 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01904] Geobacter sulfurreducens CxxxxCH...CXXCH domain
[TIGR01905] doubled CXXCH domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGGAA TGATAATGAA AGCCTCTGTA GTGATACTGC TGGCGATAAT GGTCCCGGTT
TCAGCGAGTG CCATCGATTT CCCCCATGAG ACGGGCTCTG GCAAGGGGTA TACCTGCTAT
TCCTGTCATA CCGGCCACAG TACCCTCGGC ACCACCAGTA CCGATGCGCA GAATAACATA
TGCGTGACTT GCCACAAGGC GGGCGACCCC TATGGCCAGA AAAAGAAATT CACGATGTCG
GATTTCGCCA ACCCTTTCCG TACCTATACG AGCAGTCGAC CAGCCATACT TTACCAGACA
TCCCACAACT GGGTTGGAAA GGACAATGTT CCTGCCGCAG GCGCCCTTCC TCCTGTCGAT
GTGCGCCTGA GCAAGTCGTT CCTGGTGGGG ACCATTGCCT GCGCCCGCTG TCACAGTATC
CACAACTTAT ATTCGTCAGT TCAGAACACT CGTCCCTTTC TGAGAACCCT CAATACAAAC
GACTCCATGT GCCTCGACTG CCACCGCCCC CGCAGCACCA CTGACCATAC CCTGGGTACC
CACCCGGTCA CCATGAACTA CGCTGACAAG GCCGCGGCAC GACCCGACGA GTTCTATGCC
ACGCCCCAGA ACAGCAACCC GGCCAACCCC ACGTCGGCCA TGAAGATGTC CCGCAGCGGC
GCGGTGGTCT GCACCACCTG TCACGGAGTC CACTATGCCG ACTCCAACAG CCGGACCTTC
GACAACGCCT CCAGCGCCCG GATGGGGCTC CTCTCCACCT CCCGCGGATT CCTGCTCCGG
ACCGACCTGA AGGGGGCCAC GGTCACCGAC CGGAACATCT GCACCAACTG CCACAAGTCC
GCCAACGATT CGGCCAACAC CAACGCCAGG GTCAAGAACC ATAACGGCAC CAAGAATCAA
AACGTGCAGT GCGCCGACTG CCACGGCGGC CACGTGGATG CTGCCGACGG CACGACCCCC
AACGTCTTCC TCATCAACCG CTTCATGAAT ATCTCGACCC AGTACGGCGC GGTCCGTAAC
GCCAAGGTCC TGTACCAGTA CACCTCGGCC GCCCGGAAGA ACTACAACAA GGATTCCTTC
GGCGTCTGCG TGGCCTGCCA CCCGACGCTC CCCCCCACCA TCAGCACCCA CCAGACGAGC
ACCAATGCCG CGGACTGCGG CTCGTGCCAT ACCCACTCCC AGGGGTTCTC GGCCAACTGC
ACCCAGTGCC ACGGCTTCCC GCCCCAGGCC AACGTGGCGT CCGGTCCGTC GGGTTATGCG
AAGGACGGCG TCCGCGACTA CAGCACCTCG GGGGTCTCCA AGGATGAGTC GGCAACTCCG
CACATCAGTC ATGCCGGCGG CGGCTCCTAT TACAGTTTCG CCTGCGACGA CTGCCACAAG
GGATTCGGAC ACAACCAGGG GACGTTCCAG GATGTCTTCC TCTCCCCGAC CGGCACGAAA
GCTGCGACCA ACGGCGCCAC CCCCGCATAC AGCGGCACGG GGAGCGGCAC CTGTTCAACC
ACCTACTGCC ACTCCAACGG GAACGGCGTC TACACTTCGC CCACCTGGGC CAACGGCAAG
AACACCATTA TGGGGCTCGC GCCGGCGGCC CGCTGCGGCA GCTGCCACAG CGCCACTCCC
GTCACCGGCG CCCATAACCG TCACATCGCC GGCGGCGCCA GCGGCAAGAG CTACGGCTGC
GCGAACTGCC ACGCCGCGAC GGTGAGCGAC AACACGACGC TCCTGGCCGC TGCCCGGGCC
AACGGCGGCG CCCACGTGAA CGGTGTGAAG GACAAGCAGT TCTCCGGGGC CATTGGAGGT
CAAGCCCTCT CGGGGACTGA CTGCTCCACG GTCTACTGCC ACTCCAACGG CAAAGGTGCC
GCGCCGGTCG TCGCCCCGGT CTGGGGCAAC CCTGCGTCGG GCCAGTGCGG CGCATGCCAC
AAGGCAACCG GTGCGACTCC CATGGACACC TATGGCCATA CGGCCCACCT GACAGCCACC
TACGGGCCGA ATCTCGGGAC TGCGGTCTCC GCCTGTCAGA AATGCCATAC CTACACCGAC
GATCTGGCGG CTACCCACGT GAACGGGATT GTTGACGTGG GGGCAACCAC CTGCACCACC
AACTGCCACA AGCAGAGCGC TGCCTGGACC GGCGGCCGCG TAACCTGCGA GAGTTGCCAC
ACCACCCCGC TATCGGTCAT CAACGGCTTG ACCGCGCCGT CGAAACCGAA TTTTACCTCC
TCCGGCCACG GCCAGGCGGG TGCCAATTAC GACGCAAGCC GCCAGTGCGT CAACTGCCAC
GACAACACCA GTGCCCATAT CTCCACGGCA CTCGGCACCT ACAAGCGGAT CGCCGTCAAC
GACAATACCC TCTGCTCCGG CTGCCACAAC GACTCGGTCA AGGTGCCGAC CGCAACCAAG
CGCAATGTGC CGACCCACGC CACGGCCAAG GGTACCTACA CCATGGACTG CAAGGTCTGC
CACGACGTCC ACGGCACCGG TAACCGGGGG ATGGTCCGCA CCTTCATCAC CTTCGGCACC
CTCACCTCCA CCATAACCTA TGCCACCACC GCCGATCTCG TGCAGCTTGT CCCGCCCTAC
CGCGGTGTCT GTCAGACCTG CCATACCGCC ACGAGCCACT ACAAGCGCGG CGTCGACGAG
GGGGCGAACC ACCCCACAAC GAACTGCCTC AACTGCCACT CCCACAAGAA CACCTATGCC
TTCAAGCCGA GGGCCTGCAA CGAGTGCCAC GGCTATCCGC CGGCACCCAA GGGCTTCGTG
GCGTCCCAGG CCACCTACTC GTCGGCCAAG CTCGAGAACT ACTCGGGCGG TGGCGGCGCC
CACGTGAAGC TGGGCCACCT CATGGCGAAC CTCAGGCCGA CCCAGGGCTT CACCCCGTGC
CTCGCCTGCC ACAATGGCGG ACCGGCGGCC CACACGGGCG ACGACACCAT CTGGACCAGC
GGCACCACCC AGTCGAAGAA GGCGCCGGTG ACGGTGAAGA TCGACCCGAC CTACAAGTTC
AACGCCACCA AGGGCCAGTG GTACTCGCAA CAGGCGCCCG ACGCCACCGG CAGCTGCTGG
AACGTCAGCT GCCACTTCCA GCCGACACCA CGCTGGTCCA ACGACAAGTA G
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| Protein sequence | MYGMIMKASV VILLAIMVPV SASAIDFPHE TGSGKGYTCY SCHTGHSTLG TTSTDAQNNI
CVTCHKAGDP YGQKKKFTMS DFANPFRTYT SSRPAILYQT SHNWVGKDNV PAAGALPPVD
VRLSKSFLVG TIACARCHSI HNLYSSVQNT RPFLRTLNTN DSMCLDCHRP RSTTDHTLGT
HPVTMNYADK AAARPDEFYA TPQNSNPANP TSAMKMSRSG AVVCTTCHGV HYADSNSRTF
DNASSARMGL LSTSRGFLLR TDLKGATVTD RNICTNCHKS ANDSANTNAR VKNHNGTKNQ
NVQCADCHGG HVDAADGTTP NVFLINRFMN ISTQYGAVRN AKVLYQYTSA ARKNYNKDSF
GVCVACHPTL PPTISTHQTS TNAADCGSCH THSQGFSANC TQCHGFPPQA NVASGPSGYA
KDGVRDYSTS GVSKDESATP HISHAGGGSY YSFACDDCHK GFGHNQGTFQ DVFLSPTGTK
AATNGATPAY SGTGSGTCST TYCHSNGNGV YTSPTWANGK NTIMGLAPAA RCGSCHSATP
VTGAHNRHIA GGASGKSYGC ANCHAATVSD NTTLLAAARA NGGAHVNGVK DKQFSGAIGG
QALSGTDCST VYCHSNGKGA APVVAPVWGN PASGQCGACH KATGATPMDT YGHTAHLTAT
YGPNLGTAVS ACQKCHTYTD DLAATHVNGI VDVGATTCTT NCHKQSAAWT GGRVTCESCH
TTPLSVINGL TAPSKPNFTS SGHGQAGANY DASRQCVNCH DNTSAHISTA LGTYKRIAVN
DNTLCSGCHN DSVKVPTATK RNVPTHATAK GTYTMDCKVC HDVHGTGNRG MVRTFITFGT
LTSTITYATT ADLVQLVPPY RGVCQTCHTA TSHYKRGVDE GANHPTTNCL NCHSHKNTYA
FKPRACNECH GYPPAPKGFV ASQATYSSAK LENYSGGGGA HVKLGHLMAN LRPTQGFTPC
LACHNGGPAA HTGDDTIWTS GTTQSKKAPV TVKIDPTYKF NATKGQWYSQ QAPDATGSCW
NVSCHFQPTP RWSNDK
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