Gene Gmet_0554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0554 
Symbol 
ID3738388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp591018 
End bp592517 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content59% 
IMG OID637777828 
Producthistidine kinase 
Protein accessionYP_383522 
Protein GI78221775 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCTTCA AAAGCCTGAC AACGAGAGTT ATCGTAACCC TGGTCGGCCT CCTTTCCGTG 
GGAATCGGCA CCTTTACCTA CTTCAACCTC AAACGGGAAA AAGACCAGCT TGTCAAGGCA
ACCCGCGAGA ATGCCTACCT CCTTCTCGAC ACTATCGAGC GCAGCATCTA CAAGTCCATG
AGCGTTGGTG ACACCCAGGA TGTGCAGGTC ATGCTGCAGA TGGTGGGCCA TAGCCACAGC
AAACTCATCG GCGTCAGGAT ATTTCATCCC CAGGGAATCG TCCTCAAGTC GTCCCGGCCC
GAGGAGGTGG GGATGCCGGT GCCCGAGGGG GATTACCAAC TCTTTATCAA CAACCGCAAG
GAAGGTGTCT ACTCCAGCGA CGCCTTCGGT GAGGTCCTCG GGGTTATCAA GCCGATCTAC
AACGATGTGC TGTGCCAACG GTGCCACGGC ACCAAAAAGC GGCTTATCGG GGTTCTCAAC
GTCAACTACT CCCAGGTCGA GACCAACCGC CGGATTCTTG AGGCAACGCG GCTTTCCCTC
GTCTCCACCG GTGCGGTCAT TCTCTTCTGC GCGGCAGCCA TCTCCCTCGT CATCGTCCGA
TTTGTCCGGC AACCCTTGAA CAACCTCATC GACAGCATGG CGCGGGTGGA GGAGGGAGAC
CTTTCCGTCC GCATAACCCC TGTGGCCGAG GACGAGATCG GCCGGCTCAT CGTGAGTTTC
GACTCCATGG TCGGCAAGCT CGACAAGGCG AAGAGGGAAC TGGAAGAGTA CCACTTCCAG
CAGATGGAAC GGGCCGATCG TCTGGCCTCG GTGGGGGAAA TGGCCGCGGG GATCGCTCAC
GAAATCAAGA ACCCCCTGGC CGGCATCTCG GCGGCCATGA CCATCATCCG TCAGGATTTT
TCCGACGAAG ATCCCCGCAA GGAGATCATC GGAGAAGTGG TCGAGCAGGT GAGCCGGCTC
GACAAGACGG TGAACGATCT CCTGTTCTTC GGCAAGCCGA CCCCCCCCGA ACCGACCTAT
GCCGACGTGA ACGCGATCCT GCGGAAAACC CTCCTCTTCG CCCTGCAGCA CAAGGGGGGA
AAGAATATCG CCAAGAGCCT GGATCTTGCC GACGGCCTTC CGGAAATCTT CGTGGACCCG
AAGCAGGTGC AGCAGGTTTT CCTGAATCTG ATCCTTAACG CCATCCAGGC CATGCAGGCC
GACGGGGGGA CCCTCACCGT GGGGAGTTCC CTGGTGGACC TTGACGGCAA GGGGTGGGTG
CGCACCACCA TTGCCGACAC TGGCCCCGGC ATCCCGGAGC CGATCATCGG CAAAATCTTT
ACCCCCTTCT TCACCACCAA GGCACAAGGG ACGGGGCTTG GACTCGCCAT CTGCCACAAG
CTCATTACCC AGCATGGCGG TACCCTTTCC GTGACCAGCG AAGACGGCAA AGGAACGGTG
TTCACCATCG ATCTGCCGGT GGCGGCATAC GAAGAGGGTG CGCCGGAAGA AGAGGCATAG
 
Protein sequence
MIFKSLTTRV IVTLVGLLSV GIGTFTYFNL KREKDQLVKA TRENAYLLLD TIERSIYKSM 
SVGDTQDVQV MLQMVGHSHS KLIGVRIFHP QGIVLKSSRP EEVGMPVPEG DYQLFINNRK
EGVYSSDAFG EVLGVIKPIY NDVLCQRCHG TKKRLIGVLN VNYSQVETNR RILEATRLSL
VSTGAVILFC AAAISLVIVR FVRQPLNNLI DSMARVEEGD LSVRITPVAE DEIGRLIVSF
DSMVGKLDKA KRELEEYHFQ QMERADRLAS VGEMAAGIAH EIKNPLAGIS AAMTIIRQDF
SDEDPRKEII GEVVEQVSRL DKTVNDLLFF GKPTPPEPTY ADVNAILRKT LLFALQHKGG
KNIAKSLDLA DGLPEIFVDP KQVQQVFLNL ILNAIQAMQA DGGTLTVGSS LVDLDGKGWV
RTTIADTGPG IPEPIIGKIF TPFFTTKAQG TGLGLAICHK LITQHGGTLS VTSEDGKGTV
FTIDLPVAAY EEGAPEEEA