Gene Gmet_0527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0527 
Symbol 
ID3738048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp565591 
End bp567024 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content64% 
IMG OID637777801 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionYP_383495 
Protein GI78221748 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCGA CGGAGCGTGA AGTGACCCAC CCGGGGGCTC TCTCCCTCAC CGCACGGCTC 
ACCATCCTCT CCACCCTGGC CACCACGTGT GTTCTCCTCT TTGTCATCGT CTTCCAGTTT
CTCGCCCTGG CAAGCGACCT GGAGTTCGAG GACAACAACT TCATCATCGA GAAAATACGG
GTGATCGAGG CGATCATTGC CCGCTACCCC GACGACTCCG CCCACCTTGA TCAGGAAGTC
AACTGGGAAG GGGCCCTGCG GCAGGACACC CGTTACCTGG TTCGAATCAT GGGGCGGCAG
GGAAATGTGG TCATGGAGAC ACGGGGAATG GACCGCATTG TTCCTGCCCG CCAGTTCCCC
CCGCCAGCCC GGGATTCCCG CGCCATCGGC CAAGGCAAAA AGCTCCACGT GCAAGACGGG
CGGATCTATC TGCTGAACTC CGCCTGGGGA ATGTCGGAGA AGGGGCTTTC ATCCCGCTTT
ATCCAGGTGG CCCTCGACGT GACCGACGAC GAGGATATCC TTCAGGGATA CAAGCAGAAG
ATGGCTTTTG TGTTTCTGGC CGGCATTTGC CTTTCGGCCG CTCTCAGTGC CGTGGTGGTG
CGCCGGGGCC TCCGCCCCCT GGCAGAGATT ACCGGTGCGG CCGGACGCAT CGATGTGACG
ACCCTTGATG AACGCCTCGG TGCCCGGGTA TGGCCCCGGG AACTGGCCCG TTTCGCCGCC
GCCTTCGACG GCATGCTCGA CCGCCTTGAA ACGTCTTTCG ACCGGCTCGA AGCATCCTCC
GCCAACCTGG CCCACGAAAT CCGCACCCCC ATCAACATCC TTCGGGGCGA GGCCGAGGTG
GCTATCTCCC GGGCCCGCTC CGCCGAAGAG TACCGGCGGG TCATCGAGTC GAGCCTTGAG
GAGTACGAGC GCCTCTCGCG CCTGATCGAC AACATCCTCT TCCTGGCCAG GGCCGAGCAA
CGGATCGAGC CGATCCCCCT GGACATGCGC GGCGAACTGG AACTGCTCCT GGACTTCTAC
GGCACCCTGG CGGAAGAGAA GGAGATAACC ATTTCCTGCT CCGGCCGGGG TGAGATACAT
GCTGACCCGC TCCTCTTCCA GCGGGCCGTC GGCAACCTGC TCTCCAACGC CATCCGCTAC
ACCCCCACGG GAGGGGCGAT CACCGTCTCC TTCACCCGGG ACAACGACGG CGCCGCCCAT
CTCACCGTTA CCGACACCGG CATCGGCATC GCGCCGGACG ATCTCCTCCG GGTCTTCGAC
CGCTTCTACC GCAGCAGCGA GGCCCGCGCC CTCAATGCCC AGGGGACCGG CCTCGGCCTC
GCCATCGTCC GCTCCATCAT GGACCTCCAC GGGGGAAGCG TTTCGGTCTC CAGCGAACCG
GGGCGGGGAA CCGCCGTGAC GCTCCACTTT CCCGCAGCTC CGTCACCATT GTAA
 
Protein sequence
MSSTEREVTH PGALSLTARL TILSTLATTC VLLFVIVFQF LALASDLEFE DNNFIIEKIR 
VIEAIIARYP DDSAHLDQEV NWEGALRQDT RYLVRIMGRQ GNVVMETRGM DRIVPARQFP
PPARDSRAIG QGKKLHVQDG RIYLLNSAWG MSEKGLSSRF IQVALDVTDD EDILQGYKQK
MAFVFLAGIC LSAALSAVVV RRGLRPLAEI TGAAGRIDVT TLDERLGARV WPRELARFAA
AFDGMLDRLE TSFDRLEASS ANLAHEIRTP INILRGEAEV AISRARSAEE YRRVIESSLE
EYERLSRLID NILFLARAEQ RIEPIPLDMR GELELLLDFY GTLAEEKEIT ISCSGRGEIH
ADPLLFQRAV GNLLSNAIRY TPTGGAITVS FTRDNDGAAH LTVTDTGIGI APDDLLRVFD
RFYRSSEARA LNAQGTGLGL AIVRSIMDLH GGSVSVSSEP GRGTAVTLHF PAAPSPL