| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0524 |
|---|
| Symbol | |
|---|
| ID | 3738045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 560999 |
|---|
| End bp | 562738 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637777798 |
|---|
| Product | binding-protein dependent transport system inner membrane protein |
|---|
| Protein accession | YP_383492 |
|---|
| Protein GI | 78221745 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4986] ABC-type anion transport system, duplicated permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 76 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGCCCC ACACCACCGA CGACAACTTC CGCGGAAAGC TCACGACGCC CAATGCCTGG
GATCTGGCGG CATTCTTTCT TGTCATGGGC ATCATCGCGC TCCTCGCCTG GGGAAGCCGG
GAAATGGCCC TCCCCTATGT GCCGGGGAAG ACGGTCCCCT CCCTCTCCCC CGATCCGTGG
CACCTCCCCT ACTACGCGCT GCGGACCGTA ATCAGGATGG GGGCGGCCCT CGGCCTCTCC
CTCGCCTTCA CCCTCACCTA CGCAACCCTG GCGGCCAAGA GCCGCCGGCT CGGCCCGATC
CTCGTGCCGG CTCTCGACAT CCTCCAGTCG GTGCCGATCC TCGGCTTCCT CTCCGTGACC
GTAACCGGCT TCATCTCCCT GTTCCCGGGG AGCCTCCTGG GGGTCGAGGC CGCTTCCATC
TTTGCCATTT TTACCTCCCA GGCATGGAAC ATGGCCTTCA GTTTTTACCA GTCCATGAAA
ACCGTCCCCA AGGACCTGGG AGAAGCGGCC ACCATCTTCG GCCTCTCCCC CTGGAAGCGG
TTCTGGCGGG TAGAGGCTCC CTTCGGCGTC CCCCCCCTCA TCTGGAACAT TATGATGTCG
GTCTCGGGGG GGTGGTTTTT CGTGGTGGCC TCCGAGGCGA TCACCGTGGG GAAGACCTCC
GTGACCCTCC CCGGCATCGG CTCCTACATG GCGCTCGCCA TCCACCGGCA GGACCTGGGC
GCCATAGGAT GGGCCCTGGC GACCATGGCC CTGGTCATCT TCCTCTACGA CCAGCTCTTC
TTCCGCCCCC TCGTGGCATG GGCCGAAAAA TTCCGGGTGG AGCTCACTGA ATCGGGCGCT
CCTCCGGAAT CGTGGCTTCT CACCATCTTC ACCCGGACGC GGCTCATGGG CCGGCTCCTT
CGTCTGATTG GCGCGCTACC GGCACGGCTG GCAGAGCGTT TTCCCCGGAG ACGCCGCCTC
CCGCGCCGGT CGAGGTACCC CATCCGGCCG GAAGTACAGC GGACCATCGA TCGCGCCTGG
AACGCAATCT TTGCCCTGGC AGCGCTCTAC GGCCTCTGGA AACTGGCAAC CTTCGTGAGC
GTCATCCCCC TCCGCGAGGT GCTCTCCGTC TTCGGGCTGG GTCTGGCTAC CCTGGCGCGG
GTGACGGTCC TCCTCGCCCT GGCCTCGCTT CTCTGGATCC CTGTGGGGGT CAGGATAGGG
CTCAATCCCC GGTGGGCGAC TCGCGTTCAG CCGGTGGCCC AGTTCCTGGC CGCGTTCCCC
GCAAACCTCT TCTTCCCGGT AGTGGTGGTC CTCATCGTCC GTTTCCGGCT CAATCCTGAA
ATCTGGACCG CCCCCCTCAT GATCCTCGGC ACCCAGTGGT ACATCCTCTT CAACGTCATC
GCCGGGGCCT CCGCCATCCC CAACGACCTG CGCGAAGCGG CGACCAACCT GGGGCTCTCG
GGGTGGGAGC TCTGGCGGCG GCTGCTCCTC CCCGGCATCT TCCCCTCCCT GGTGACGGGG
CTCGTGACCG CCTCGGGAGG AACCTGGAAC GCGAGCATCG TTGCCGAGAT GGTGAGCTGG
GGCCCCACCA CCCTCACCGC CACCGGCCTC GGTTCGGCCA TTGCCCGCTG GACCGAGCAG
GGGGACTACC CCCACATCGT TCTCGGCATC GCGGTAATGA GCATCTTCGT TGTCTGCCTG
AACCGCCTCT TCTGGCGCAG GCTCTACCTC CTGGCCCAGA CCAGGTATCG CCTTGACTAG
|
|---|
| Protein sequence | MQPHTTDDNF RGKLTTPNAW DLAAFFLVMG IIALLAWGSR EMALPYVPGK TVPSLSPDPW
HLPYYALRTV IRMGAALGLS LAFTLTYATL AAKSRRLGPI LVPALDILQS VPILGFLSVT
VTGFISLFPG SLLGVEAASI FAIFTSQAWN MAFSFYQSMK TVPKDLGEAA TIFGLSPWKR
FWRVEAPFGV PPLIWNIMMS VSGGWFFVVA SEAITVGKTS VTLPGIGSYM ALAIHRQDLG
AIGWALATMA LVIFLYDQLF FRPLVAWAEK FRVELTESGA PPESWLLTIF TRTRLMGRLL
RLIGALPARL AERFPRRRRL PRRSRYPIRP EVQRTIDRAW NAIFALAALY GLWKLATFVS
VIPLREVLSV FGLGLATLAR VTVLLALASL LWIPVGVRIG LNPRWATRVQ PVAQFLAAFP
ANLFFPVVVV LIVRFRLNPE IWTAPLMILG TQWYILFNVI AGASAIPNDL REAATNLGLS
GWELWRRLLL PGIFPSLVTG LVTASGGTWN ASIVAEMVSW GPTTLTATGL GSAIARWTEQ
GDYPHIVLGI AVMSIFVVCL NRLFWRRLYL LAQTRYRLD
|
|---|
| |