Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_0494 |
Symbol | |
ID | 3738327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 539787 |
End bp | 540206 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637777768 |
Product | nickel responsive regulator |
Protein accession | YP_383462 |
Protein GI | 78221715 |
COG category | [K] Transcription |
COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 79 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGAAA CCGTCAGATT CGGCATCTCC ATCGACGACA AACTGCTGGA GAGTTTCGAC CGCCTCATCG AGCAGAAGGG GTACATGAAC CGCTCCGAGG CGGTCCGCGA CCTGATCCGC GCGGCCCTGG TGGAGCTCAA GTGGGAAGGG GGCGAGGAGG AGACCGTCGG CACCGTGACC CTCGTCTACA ACCACCACGT CCGGGACCTC TCCGACAAGC TCACCGAGCA GCAGCACTCC CACCACAATG AGATCGTCTC GGCCCTCCAC GTCCATCTGG ATGCCCACAA CTGTCTTGAG GTCCTCGTGG TGCGAGGCAA GGCCCGGGAG GTGAAGAAGA TCGCCGACGA GCTGATTGGC GTGAAGGGGG TCAAACACGG CAAGCTCGTC ATGACCACCA CGGGGGAGGA ACTGCACTGA
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Protein sequence | MGETVRFGIS IDDKLLESFD RLIEQKGYMN RSEAVRDLIR AALVELKWEG GEEETVGTVT LVYNHHVRDL SDKLTEQQHS HHNEIVSALH VHLDAHNCLE VLVVRGKARE VKKIADELIG VKGVKHGKLV MTTTGEELH
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