| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0467 |
|---|
| Symbol | cobT |
|---|
| ID | 3739834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 514370 |
|---|
| End bp | 515431 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637777741 |
|---|
| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| Protein accession | YP_383435 |
|---|
| Protein GI | 78221688 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 79 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGT TGACCGAAAC CCTGTCAAAT ATCCGTCCCG TGGACGCCGG CCTCATGGCC
CAGGCCCAGG CGCGGCTCGA CAACAAGACC AAGCCCATCG GCTCCCTCGG CCGCCTGGAG
GAGTTCGCCC GGCGCACCGT GGCCATTAGC GGGAGCCTGG ACCCTTCTAC GGCGAAGAAA
GCGATCTTCA CCTTCGCCGC CGACCACGGG GTGGTGGAGG AGGGGGTTTC CGCCTTCCCG
AAGGAAGTGA CGGTCCAGAT GGTCTTCAAT TTCCTCAAGG GGGGAGCCGG GATCAACGTC
CTTGCCAACC ACGTGGGTGC CGATGTCCTC GTGGTGGACA TGGGGATCGA CCATGATTTC
GGCGACACCC CTGGCCTCAT CGACCGCAAG GTGGCCCGCG GTACCCGCAA CATGGCGAAG
GGGCCGGCCA TGACCCGGGA GGAGGCCGTG ACGGCCCTGG AAGCGGGGAT CGAACTGGCC
TGCGGCTGCA AGGCCGACGG AGTTGCCATG GCGGGTACCG GGGAGATGGG AATCGGCAAC
ACGACGGCGG CATCGGCCAT CATCGCCGCC TTCTCCGGGA AAACCGTCGC CGACGTGACC
CACCGGGGAA CCGGCATCAA TGACGCCGCA CTGGCGAAGA AGGTCACGAT CATCGAGCAG
GCCCTTGCCG TGAACCGCCC CGACCCGAAG GACCCCATCG ACGTCCTTGC CAAGGTGGGG
GGGCTGGAGA TCGCCGGCAT CGCCGGCCTT GTCCTCGGCT GCGCCGCCAA TCGGATTCCG
GTGGTGGTGG ACGGCTTCAT CTCCACGGCC GGCGCCCTCA TTGCCTGTGA GCTTTGCCCC
ACGGTGAAGG AGTACATTTT CGCGGCCCAC GAGTCGGTGG AGATCGGCCA CCGGTTCATG
CTGGAGCGGA TCGGCGCGGA ACCGATCCTC GATCTGCACC TGCGCCTCGG CGAGGGGACC
GGAGCGGCTC TGGCCATGGG GCTCATCGAA GCGGGAGTCA AGATTCTGAA AGAAATGGCC
ACCTTCGCGG AGGCCGGCGT GGAAAAAGGC CGGGACCAGT AA
|
|---|
| Protein sequence | MTLLTETLSN IRPVDAGLMA QAQARLDNKT KPIGSLGRLE EFARRTVAIS GSLDPSTAKK
AIFTFAADHG VVEEGVSAFP KEVTVQMVFN FLKGGAGINV LANHVGADVL VVDMGIDHDF
GDTPGLIDRK VARGTRNMAK GPAMTREEAV TALEAGIELA CGCKADGVAM AGTGEMGIGN
TTAASAIIAA FSGKTVADVT HRGTGINDAA LAKKVTIIEQ ALAVNRPDPK DPIDVLAKVG
GLEIAGIAGL VLGCAANRIP VVVDGFISTA GALIACELCP TVKEYIFAAH ESVEIGHRFM
LERIGAEPIL DLHLRLGEGT GAALAMGLIE AGVKILKEMA TFAEAGVEKG RDQ
|
|---|
| |