| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0458 |
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| Symbol | |
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| ID | 3738715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 506787 |
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| End bp | 507815 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637777732 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_383426 |
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| Protein GI | 78221679 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | [TIGR03589] UDP-N-acetylglucosamine 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTACAG GAAAATCCAT TCTCGTTACC GGGGGCACCG GATCATTCGG CAAGAAATTC
ATCGAGACAA TCCTCACCTC GTACCCCGAG GTAAAGCGGA TCGTGGTCTT CTCCCGGGAC
GAGCTGAAGC AGTTCGAGAT GGCACAGCAG TTTCCGCCCG ACAGGTACCG TCAGATACGC
TACTTCATCG GCGATGTCCG CGACAAGGAT CGTCTCTATC GGGCCTTCGA GGGGATCGAC
ATCGTTGTCC ACGCCGCAGC CCTTAAGCAG GTGCCCGCCT GCGAATACAA CCCCTTCGAG
GCCATCAAGA CCAACATTCT CGGCGCCCAG AACATCATCG AAACAGCACT TGAGCAGGGA
GTAACGAAGG TTGTAGCGCT GAGCACCGAT AAGGCCGCCG CCCCCATCAA CCTCTACGGT
GCAACTAAGC TCTGCTCCGA TAAACTTTTT GTGGCGGCCA ACAATTTCCG GGGGAAAAAC
GAGATCAAAT TCTCGGTGGT CCGGTACGGC AACGTAATGG GAAGCAGGGG AAGCGTCATC
CCCTTTTTCC TGAAGAGGAA ACGCGAAGGG GTGCTGCCCG TCACCGACGA ACGGATGACC
CGCTTCAACA TCACCCTTGA AGACGGGGTC AAACTGGTGC TCAAGGCCCT GGACATCATG
TGGGGAGGGG AAATTTTCGT CCCCAAAATC CCGAGCTACC GGATCCTGGA CGTGGCCAAG
GCCGTCGACT CCGGTTGCCG GATCGAGATC GTCGGCATCA GGCCGGGGGA AAAGCTGCAC
GAGGAGATGA TCACCACCAC CGATGCCCTG AACACCATTG AGTTCAAGGA CTACTTTGTC
ATTCTCCCCT CCATGGCGTT GTGGAATACC GAGCAGTTCA CGAATCATTT CGGCGGGCGT
CACTGCGCCG ACGGGTTCGC CTACAACAGC GGCACCAACA GCGACTGGCT CAGCGTCGAG
CAGCTGAGGG AGTTGATCTA CACCCACCTC AACCCTGACA TCAACCGCCG CAAGGACGAT
TTCGCATGA
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| Protein sequence | MLTGKSILVT GGTGSFGKKF IETILTSYPE VKRIVVFSRD ELKQFEMAQQ FPPDRYRQIR
YFIGDVRDKD RLYRAFEGID IVVHAAALKQ VPACEYNPFE AIKTNILGAQ NIIETALEQG
VTKVVALSTD KAAAPINLYG ATKLCSDKLF VAANNFRGKN EIKFSVVRYG NVMGSRGSVI
PFFLKRKREG VLPVTDERMT RFNITLEDGV KLVLKALDIM WGGEIFVPKI PSYRILDVAK
AVDSGCRIEI VGIRPGEKLH EEMITTTDAL NTIEFKDYFV ILPSMALWNT EQFTNHFGGR
HCADGFAYNS GTNSDWLSVE QLRELIYTHL NPDINRRKDD FA
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