| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0419 |
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| Symbol | |
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| ID | 3738174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 465281 |
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| End bp | 467473 |
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| Gene Length | 2193 bp |
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| Protein Length | 730 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637777693 |
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| Product | Terpene synthase:squalene cyclase |
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| Protein accession | YP_383387 |
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| Protein GI | 78221640 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01507] squalene-hopene cyclase
[TIGR01787] squalene/oxidosqualene cyclases |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGG GAATTCTCAA CAAGTTTGCC GTGATCGCCG GCAACAAGAA CGCCGGACTG
ACGGCCGAGG AAGAATGCAC CGTCGTCGCA CCCATAAAAG AGGTCTCGGG AAAGGCCGTC
CACTGTCGTC AGGCCGTCAA AATGGCGGAG GAGTATCTGC TGGCGCTTCA GAATCCAGAG
GGGTACTGGG TCTTTGAACT GGAGGCGGAC GTCACAATAC CGTCGGAGTA CATCATGCTT
CAGCGGTTTC TCGGCAGGGA GATTTCTCCG GAACTGAGGA TGCGGCTGGA GAATTACCTC
CTGGACAGGC AATTGCCCGA CGGCGGCTGG CCCCTCTACG CCGTGGACGG ATTCGCCAAT
ATCAGCGCCA CGGTCAAGGC CTATCTCGCC CTCAAGGTGC TGGGGCACTC ACCCCAGGCA
CCCCACATGA TACGCGCGCG CATCATGGTC CTCAGCCTCG GCGGCGCGGC CAGGTGCAAT
GTGTTCACGC GTATCCTTCT GGCCCTGTTC GGCCAGCTCC CCTGGCATAC CCCACCGGCA
ATGCCCGTGG AGATCGTCCT TCTGCCACAG CGGTTTTTCT TTCATTTGAG CAAAGTCTCC
TACTGGTCGA GAACCGTCAT CGTCCCCATG CTGCTGCTCT ACGCCAAGCA ACCCGTCTGC
CGGTTGCGGC CCGAGGAGGG AATTCCCGAA CTGTTCAACA CACCGCCCGA CAAGCTGCGC
AACCTTGATG GCTTTCAGTC GGGGCGCTGG CGGAAAAACG CCTTCATCAT CATTGACCGC
CTGCTCAAGC GTTTCAACCG TTTCATCCCT TCCGCCATTC ATCGGAAGGC CATGGCCGAA
GCAGAGCACT GGACAAGATC CCGCATGCAG GGAAGCGGCG GGATCGGCGC CATTTTCCCG
GCCATGGCCT ATGCGGTCAT GGCCCTCCGC GTGCTCGGAT GCAGGGAAGA CGACCCCGAC
TATGTACGGG GGATGCAGGC CATCGACGAC CTCCTCCAGC ATCGCACTCC CCAGGAAGCT
GATTCTCCCC GCACGGGCGG ACCGTGCATC GACAGCGGCA CGTCGGCGGC TTTTGCCTTC
GATCCCTCTC CCCACGCGGC AGCGGACGGC AGAGGGAACA GCAGCATCTG CCAGCCATGC
AATTCCCCGA TCTGGGACAC CTGCCTAAGC CTTTCGGCGC TCATGGAAGC AGGCATGCCG
GCGAGCCACC CCGCAGCGAA ACAGGCCGTT GAATGGCTGT TATCCCAGCA GATTTTCTCA
CCAGGAGACT GGTCGTTGAA GGCTCCTGAT CTGGAGGGGG GCGGATGGGC TTTCCAGTTC
GAAAACACCC TCTATCCCGA CCTGGACGAC ACCTCGAAAG TCATCATGTC GCTTCTCCGT
GCCGGAGCGC TGGAGAATGG GCTCTACCGC GACCGGGTGG CCCGCGGCGT GAATTGGGTA
CTCGGGATGC AGAGCAGTGA CGGAGGGTGG GCAGCCTTCG ACATCGACAA CAACTACCAC
TACCTGAATG ATATCCCGTT CGCCGACCAC GGGGCGCTCC TCGACCCGAG CACCTCGGAC
CTGACGGGAC GCTGCATCGA GCTTCTCTCC ATGGTCGGTT TCGACAGGAC GTTTCCCCCC
ATCGCGCAGG GGATCGGTTT CCTGCGCTCG AAGCAGGAAG GGAGCGGCGC CTGGTTCGGC
CGATGGGGGG TAAACTACAT CTACGGTACG TGGTCGGTGC TGTCCGGCCT CAGACAGGCA
GGGGAAGATA TGCAGCAGCC CTATATCCGC AGGGCAGTGG GATGGTTGAC GTCATGCCAG
AACCACGACG GGGGATGGGG AGAAACCTGC TATTCCTACG ACGATCCTTC GCTGGCCGGC
CAAGGGGAGA GCACCCCGTC TCAGACGGCC TGGAGTCTCC TGGGGCTCAT GGCCGCCGGA
GATGTTCACA GCCTGGCCGT CCGGCGTGGC GTGCGCTACC TGCTCGACCA CCAGAATCAA
TGGGGAACCT GGGAGGAGAA ACATTTTACC GGTACCGGAT TCCCGAGGGT CTTTTACCTG
CGCTACCACG GGTACCGCCA CTACTTTCCC CTGTGGGCGC TCGGCGTCTA TTCACGGCTC
AGCTCGGGAC AAAAGACCCG CCAGGAGGAA CGCCGCCATT CATCGCCCGG CGATCTCCAT
CTCCCTTGGC TGGAGAGAAT CGGAAGACGA TAG
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| Protein sequence | MAKGILNKFA VIAGNKNAGL TAEEECTVVA PIKEVSGKAV HCRQAVKMAE EYLLALQNPE
GYWVFELEAD VTIPSEYIML QRFLGREISP ELRMRLENYL LDRQLPDGGW PLYAVDGFAN
ISATVKAYLA LKVLGHSPQA PHMIRARIMV LSLGGAARCN VFTRILLALF GQLPWHTPPA
MPVEIVLLPQ RFFFHLSKVS YWSRTVIVPM LLLYAKQPVC RLRPEEGIPE LFNTPPDKLR
NLDGFQSGRW RKNAFIIIDR LLKRFNRFIP SAIHRKAMAE AEHWTRSRMQ GSGGIGAIFP
AMAYAVMALR VLGCREDDPD YVRGMQAIDD LLQHRTPQEA DSPRTGGPCI DSGTSAAFAF
DPSPHAAADG RGNSSICQPC NSPIWDTCLS LSALMEAGMP ASHPAAKQAV EWLLSQQIFS
PGDWSLKAPD LEGGGWAFQF ENTLYPDLDD TSKVIMSLLR AGALENGLYR DRVARGVNWV
LGMQSSDGGW AAFDIDNNYH YLNDIPFADH GALLDPSTSD LTGRCIELLS MVGFDRTFPP
IAQGIGFLRS KQEGSGAWFG RWGVNYIYGT WSVLSGLRQA GEDMQQPYIR RAVGWLTSCQ
NHDGGWGETC YSYDDPSLAG QGESTPSQTA WSLLGLMAAG DVHSLAVRRG VRYLLDHQNQ
WGTWEEKHFT GTGFPRVFYL RYHGYRHYFP LWALGVYSRL SSGQKTRQEE RRHSSPGDLH
LPWLERIGRR
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