Gene Gmet_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0406 
Symbol 
ID3738161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp447082 
End bp449055 
Gene Length1974 bp 
Protein Length657 aa 
Translation table11 
GC content60% 
IMG OID637777680 
Productpenicillin-binding protein, transpeptidase 
Protein accessionYP_383374 
Protein GI78221627 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTACG ACGCGGAGAA ATGGATAACT CTCCGTATCC GCTTCATCGG GGGGTTCTTC 
GTTCTCCTCT TTGCGTTGAC GTTCTGCCGA GCTTTTTACC TTCAGGTGAT CAAGCGCGAC
TACCTTCTCA AGCTCGCCGA TCGGCAGCAC CAGAAGATTA TTCCCCTTAC GCCGGTTCGC
GGGACGATCT ACGATGCGAA TGGCGCCGCC TTGGCCGTTT CGGTTGAGAT GGATTCCTGT
TATGCCGAGC CAAAGTCCAT GGAGGACTTG GGCGAGGCTT CGGCGCAGTT GGCGCCAGTC
CTTGGCATGC CAAAGGAGTC GATCCTGAAG AAGCTCCAGG GGAACAAGAA CTTCGTCTGG
CTCCAACGGC GGCTTACCCC CGATGTGGTG AAGCGAATCC GGGACCTGGA TCTCGAGGGG
ATCGGTTTCG TCAAGGAGAC AAAGCGCTTT TATCCCAACT CAGAGGTGGC TGCCCACGTG
ATCGGGTTCA CCGGCCTGGA CCCCGAGGGA CTGGAGGGAG TAGAGCGACG CTATGACTCT
ACGATCCTTG GTGGAACCGG CTATCTGGTG ACCGAGCGGG ACGCCCTGGG ACGCAACGTG
GCCCTCAAGG GGACGGTGAT CCAGAATGGG GCCATGGGGC ACGACGTCAC CCTTACCCTG
GACAAGAACA TCCAGTATAT CGCCGAGAAG GAACTGGCCC AGGCGGTGGA AAAAAGCGGA
GCCCGCGCCG GTACCGCGCT CGTGATGGAT CCCCACACCG GCAAGGTGCT GGCCATGGCA
AATTATCCGA CCTTCAATCT GAACTCCCAT GCCTCCTACT CTCCGCAGGT ATGGCGTAAC
CGCGCCGTTG CCGACAGCTA TGAGCCCGGT TCCACCTTCA AGACCTTCCT GGTCGCCGCC
GCGTTGGAGG AAAAGGTGAT CCGGCCCGGC GACGGCATAA ATTGCGAGGG AGGAAGCTAC
GCGATCGGCG GAAGGACGAT CCACGACACG CACAAGTACG GCCGGCTCAG TATCGCCGAG
GTCCTCAAGT ATTCCAGCAA TATCGGCGCC GCCAAAATCG GGAGCCGCCT GGGACCGTCA
CGCTTGTACA CCTATCTGAA GAATTTTGGA ATCGGCGACA GGAGTGGGGT TGATCTGCCC
GGTGAAGTGG GGGGAAGTCT ACGGCCATGG AGCCAGTGGT ACGGCATCGA TCTCGCCACT
ATTTCGTTTG GTCAGGGTGT GACGACATCG TCGCTGCAAC TGGCCTCCGC CGTATCGGCC
ATTGCCAACG GCGGTGTTCT CATGAAACCC TATCTGGTCG AGAAGATCAC CGACAGCGAA
GGGAATGTAG TCACGTCTTT CGAGCCACAG GTGCGCCGAC GGGTCATTTC CCCTGAAACG
GCCAAAACGG TTTCCCGGAT GATGGAAGGG GTTGCCGCCG AGGGGGGGAC CGGAACCAAT
GCCTCGGTTG AAGGCTACCG GGTTGCCGGC AAGACCGGCA CTGCGCAGAA GGTGGACCCG
GTCACCCACG GGTACTCCGC CACGAAACGG ACCGCGTCCT TCATCGGATT TGTCCCCGCA
GACCGTCCCC GAATCACCAT TCTTGTGGTG ATTGATGAGC CGAAGACAAG CCCCTATGGC
GGTGTGGTGG CCGCTCCAGC TTTCAGCAGC ATCGCGTTGC AGACCCTCTG CTACCTTAAA
GTTCCGCCCG ACACCGTCGT CAGGAGCAAG CCGAAGACAG TGGAAGCCAA GGCAATTCCG
GAGGCCGCGG AGGCCACCGA GGCCGCCGAA GGGGCGATCG TCGAGGAGGG GGAGGGGATT
GTGATGCCCA ACTTCCGGGG GATGAGCATG CGCCAGACGC TCAAGGTTAT GGAAGAGAAG
GGGCTCAACG TACGTCTTCA CGGAAGCGGG CGGGCCATGG AGCAGAGCCC CCTTCCCGGG
CACCGGATCA AGCCCAGCGA CCAGGTTTGG GTCAAGTTCA CGCCGACGGC GTAA
 
Protein sequence
MRYDAEKWIT LRIRFIGGFF VLLFALTFCR AFYLQVIKRD YLLKLADRQH QKIIPLTPVR 
GTIYDANGAA LAVSVEMDSC YAEPKSMEDL GEASAQLAPV LGMPKESILK KLQGNKNFVW
LQRRLTPDVV KRIRDLDLEG IGFVKETKRF YPNSEVAAHV IGFTGLDPEG LEGVERRYDS
TILGGTGYLV TERDALGRNV ALKGTVIQNG AMGHDVTLTL DKNIQYIAEK ELAQAVEKSG
ARAGTALVMD PHTGKVLAMA NYPTFNLNSH ASYSPQVWRN RAVADSYEPG STFKTFLVAA
ALEEKVIRPG DGINCEGGSY AIGGRTIHDT HKYGRLSIAE VLKYSSNIGA AKIGSRLGPS
RLYTYLKNFG IGDRSGVDLP GEVGGSLRPW SQWYGIDLAT ISFGQGVTTS SLQLASAVSA
IANGGVLMKP YLVEKITDSE GNVVTSFEPQ VRRRVISPET AKTVSRMMEG VAAEGGTGTN
ASVEGYRVAG KTGTAQKVDP VTHGYSATKR TASFIGFVPA DRPRITILVV IDEPKTSPYG
GVVAAPAFSS IALQTLCYLK VPPDTVVRSK PKTVEAKAIP EAAEATEAAE GAIVEEGEGI
VMPNFRGMSM RQTLKVMEEK GLNVRLHGSG RAMEQSPLPG HRIKPSDQVW VKFTPTA