Gene Gmet_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0400 
Symbol 
ID3739379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp442976 
End bp443689 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content62% 
IMG OID637777674 
Producthypothetical protein 
Protein accessionYP_383368 
Protein GI78221621 
COG category[R] General function prediction only 
COG ID[COG1579] Zn-ribbon protein, possibly nucleic acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAAGA ATCTGTTTAT GCTTGAGGAG TTGCAGGAGC TCGACTTGAA AATCGACGGC 
CGTCAGGGAG GGCGGCAGAC GCTGCTCGAT CAGATGGTGG AGCTGGATCA GCAGGTGGAA
GAGACCCGGC TTGCGGTCGA TGCGAAGCGG GGCGAGCTGG CGCTTCTCGA AGAGGAGAAG
GAGGGGCTTG AGGCGAATCT GGTCACGGAG GACGAGAATA TCGCCCGTTC CGAGGTCCGC
CAGAAGGAGA TCAAGACCCA GAAGGAGTAC CAGGCGGTGG TCAAGGAGAT CACGGCTGCG
CGCAAGCTTA AGGCTGAACT GGAGGAGCAG ATCCTTCAGA AATCGGCCCA GGCCGAGGAG
CTCACTGCCG ATATCGCTGC CCGTGAAGCC GACCTGGCCT CTCTTGAGGA AAATATGGCG
AGCCGCAAAG CGGAGATCCA GGAGGGGCTT GACCGGATCG ACCGGGAGCT CGCCGCCGAT
GCGGCTGCCA AGGAGACAAC GGTAAAGGCG ATCCCCGCCT CCCTCGTCAA GCGTTACCTG
GCCCTACGTG AGCGGCGCCA GGGGATTGCC ATCGTGGAGG CGCGTGCAGG CAACTGCTCC
GGGTGCAACA TGAATCTCCC GCCGCAGCTC TACAATAGCC TCTTCCGGGG GGATGACCTG
GTGCTCTGTC CCCACTGCCA GCGGATGCTG TTTCTGCGTC AGGACGCTCA ATAG
 
Protein sequence
MRKNLFMLEE LQELDLKIDG RQGGRQTLLD QMVELDQQVE ETRLAVDAKR GELALLEEEK 
EGLEANLVTE DENIARSEVR QKEIKTQKEY QAVVKEITAA RKLKAELEEQ ILQKSAQAEE
LTADIAAREA DLASLEENMA SRKAEIQEGL DRIDRELAAD AAAKETTVKA IPASLVKRYL
ALRERRQGIA IVEARAGNCS GCNMNLPPQL YNSLFRGDDL VLCPHCQRML FLRQDAQ